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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180183638
OAWQ01000048
235507
Bacillota
GAA
Phe
>WENV180183737
OAWQ01000376
235507
Bacillota
GAA
Phe
>WENV180183877
OAWQ01007970
235507
Bacillota
GAA
Phe
>WENV180183790
OAWQ01001162
146699
Bacillota
TCG
Arg
>WENV180183673
OAWQ01000085
18465
Bacillota
GCT
Ser
>WENV180183675
OAWQ01000085
18465
Bacillota
GCT
Ser
>WENV180183626
OAWQ01000040
80838
Bacillota
GTA
Tyr
>WENV180183629
OAWQ01000040
80838
Bacillota
GTA
Tyr
>WENV180183631
OAWQ01000040
80838
Bacillota
GTA
Tyr
>WENV180183720
OAWQ01000191
37089
Bacillota
TAA
Leu
>WENV180183723
OAWQ01000191
37089
Bacillota
TAA
Leu
>WENV180183676
OAWQ01000085
146697
Bacillota
ACG
Arg
>WENV180183731
OAWQ01000258
237285
Bacillota
TGT
Thr
>WENV180183630
OAWQ01000040
237285
Bacillota
TGT
Thr
>WENV180183628
OAWQ01000040
237285
Bacillota
TGT
Thr
>WENV180183625
OAWQ01000040
237285
Bacillota
TGT
Thr
>WENV180183593
OAWQ01000020
237286
Bacillota
CTT
Lys
>WENV180183588
OAWQ01000020
237286
Bacillota
CTT
Lys
>WENV180183871
OAWQ01007802
295019
Bacillota
TGC
Ala
>WENV180183754
OAWQ01000400
113680
Bacillota
TAG
Leu
>WENV180183715
OAWQ01000189
295646
Bacillota
GTG
His
>WENV180183759
OAWQ01000400
412107
Bacillota
TCC
Gly
>WENV180183756
OAWQ01000400
412107
Bacillota
TCC
Gly
>WENV180183748
OAWQ01000400
412107
Bacillota
TCC
Gly
>WENV180183640
OAWQ01000048
412107
Bacillota
TCC
Gly
>WENV180183592
OAWQ01000020
412107
Bacillota
TCC
Gly
>WENV180183587
OAWQ01000020
412107
Bacillota
TCC
Gly
>WENV180183710
OAWQ01000171
80839
Bacillota
GAG
Leu
>WENV180183890
OAWQ01010582
186380
Bacillota
GTC
Asp
>WENV180183857
OAWQ01005118
338550
Bacillota
>WENV180183722
OAWQ01000191
146698
Bacillota
CAT
Met
>WENV180183719
OAWQ01000191
146698
Bacillota
CAT
Met
>WENV180183717
OAWQ01000191
39475
Bacillota
TAA
Leu
>WENV180183709
OAWQ01000167
258936
Bacillota
GGT
Thr
>WENV180183886
OAWQ01010297
147135
Bacillota
ACG
Arg
>WENV180183751
OAWQ01000400
339364
Bacillota
TTG
Gln
>WENV180183591
OAWQ01000020
339364
Bacillota
TTG
Gln
>WENV180183766
OAWQ01000530
339362
Bacillota
GTT
Asn
>WENV180183724
OAWQ01000191
339362
Bacillota
GTT
Asn
>WENV180183875
OAWQ01007867
109476
Bacillota
TAG
Leu
>WENV180183870
OAWQ01007802
198159
Bacillota
CAT
Met
>WENV180183755
OAWQ01000400
339363
Bacillota
GCC
Gly
>WENV180183639
OAWQ01000048
339363
Bacillota
GCC
Gly
>WENV180183750
OAWQ01000400
237287
Bacillota
GTG
His
>WENV180183590
OAWQ01000020
237287
Bacillota
GTG
His
>WENV180183889
OAWQ01010582
237284
Bacillota
TAC
Val
>WENV180183627
OAWQ01000040
237284
Bacillota
TAC
Val
>WENV180183688
OAWQ01000118
292519
Bacillota
CAT
Met
>WENV180183679
OAWQ01000086
292519
Bacillota
CAT
Met
>WENV180183678
OAWQ01000085
23575
Bacillota
GGA
Ser
>WENV180183749
OAWQ01000400
145469
Bacillota
TCT
Arg
>WENV180183589
OAWQ01000020
145469
Bacillota
TCT
Arg
>WENV180183757
OAWQ01000400
145469
Bacillota
TCT
Arg
>WENV180183888
OAWQ01010582
353527
Bacillota
TTC
Glu
>WENV180183734
OAWQ01000325
353527
Bacillota
TTC
Glu
>WENV180183633
OAWQ01000040
261708
Bacillota
CCA
Trp
>WENV180183674
OAWQ01000085
16361
Bacillota
TGA
Ser
>WENV180183672
OAWQ01000085
16361
Bacillota
TGA
Ser
>WENV180183632
OAWQ01000040
237288
Bacillota
CCA
Trp
>WENV180183677
OAWQ01000085
339361
Bacillota
CCT
Arg
>WENV180183809
OAWQ01001562
299139
Bacillota
TGC
Ala
>WENV180183738
OAWQ01000376
376360
Bacillota
GCA
Cys
>WENV180183641
OAWQ01000048
376360
Bacillota
GCA
Cys
>WENV180183753
OAWQ01000400
237283
Bacillota
TTT
Lys
>WENV180183752
OAWQ01000400
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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