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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180222088
OBBC01004207
148239
Bacillota
TCT
Arg
>WENV180222276
OBBC01061137
235154
Bacillota
GTT
Asn
>WENV180222214
OBBC01028183
144577
Bacillota
GAT
Ile
>WENV180222115
OBBC01009923
307003
Bacillota
TGC
Ala
>WENV180222061
OBBC01001497
59312
Bacillota
CAG
Leu
>WENV180222123
OBBC01010711
235150
Bacillota
TGC
Ala
>WENV180222151
OBBC01012599
37083
Bacillota
TGA
Ser
>WENV180222262
OBBC01050906
235117
Bacillota
TAC
Val
>WENV180222181
OBBC01021536
144599
Bacillota
GTC
Asp
>WENV180222064
OBBC01001631
100326
Bacillota
GTA
Tyr
>WENV180222089
OBBC01004207
144610
Bacillota
GTG
His
>WENV180222246
OBBC01039186
154711
Bacillota
TGG
Pro
>WENV180222275
OBBC01057961
144583
Bacillota
ACG
Arg
>WENV180222129
OBBC01010725
238974
Bacillota
GAA
Phe
>WENV180222066
OBBC01001631
238974
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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