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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180240698
OBDD01061719
24650
Bacillota
TAA
Leu
>WENV180240694
OBDD01061186
44854
Bacillota
TGA
Ser
>WENV180240716
OBDD01071232
59312
Bacillota
CAG
Leu
>WENV180240701
OBDD01064288
238910
Bacillota
CTT
Lys
>WENV180240570
OBDD01018451
245370
Bacillota
TGT
Thr
>WENV180240540
OBDD01011223
235150
Bacillota
TGC
Ala
>WENV180240671
OBDD01048763
235137
Bacillota
TGC
Ala
>WENV180240551
OBDD01011947
235294
Bacillota
TGC
Ala
>WENV180240620
OBDD01027147
340802
Bacillota
TTG
Gln
>WENV180240585
OBDD01020477
239076
Bacillota
GAA
Phe
>WENV180240475
OBDD01000566
243646
Bacillota
GTT
Asn
>WENV180240476
OBDD01000566
235697
Bacillota
GTT
Asn
>WENV180240549
OBDD01011672
340265
Bacillota
GCC
Gly
>WENV180240656
OBDD01042936
37269
Bacillota
TGA
Ser
>WENV180240686
OBDD01058971
413152
Bacillota
TCC
Gly
>WENV180240628
OBDD01029426
144599
Bacillota
GTC
Asp
>WENV180240690
OBDD01060192
145360
Bacillota
GTC
Asp
>WENV180240619
OBDD01027147
144610
Bacillota
GTG
His
>WENV180240695
OBDD01061186
4624
Bacillota
GCT
Ser
>WENV180240618
OBDD01027147
152151
Bacillota
TCT
Arg
>WENV180240724
OBDD01079247
245386
Bacillota
CCA
Trp
>WENV180240573
OBDD01018451
243098
Bacillota
GGT
Thr
>WENV180240714
OBDD01070182
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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