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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180246440
OBDP01000071
80961
Euryarchaeota
TAA
Leu
>WENV180246510
OBDP01000620
156426
Euryarchaeota
GCC
Gly
>WENV180246523
OBDP01000953
245362
Euryarchaeota
GTT
Asn
>WENV180246468
OBDP01000160
62605
Euryarchaeota
TAG
Leu
>WENV180246493
OBDP01000318
128076
Euryarchaeota
GAT
Ile
>WENV180246429
OBDP01000030
344301
Euryarchaeota
TTG
Gln
>WENV180246495
OBDP01000386
147565
Euryarchaeota
GTA
Tyr
>WENV180246458
OBDP01000133
147565
Euryarchaeota
GTA
Tyr
>WENV180246466
OBDP01000160
147570
Euryarchaeota
CAT
Met
>WENV180246525
OBDP01000953
130311
Euryarchaeota
TTC
Glu
>WENV180246470
OBDP01000160
129548
Euryarchaeota
TTC
Glu
>WENV180246467
OBDP01000160
129548
Euryarchaeota
TTC
Glu
>WENV180246710
OBDP01056967
163808
Euryarchaeota
TCC
Gly
>WENV180246460
OBDP01000133
153995
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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