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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180297650
OBJA01057676
359160
Thermodesulfobacteriota
GCA
Cys
>WENV180296508
OBJA01000706
62196
Thermodesulfobacteriota
CAG
Leu
>WENV180296830
OBJA01003316
286592
Thermodesulfobacteriota
TAC
Val
>WENV180297139
OBJA01011756
83353
Thermodesulfobacteriota
GTA
Tyr
>WENV180297774
OBJA01081588
154121
Thermodesulfobacteriota
GTC
Asp
>WENV180298712
OBJA01555400
279389
Thermodesulfobacteriota
GGC
Ala
>WENV180299035
OBJA01903860
256451
Thermodesulfobacteriota
CTT
Lys
>WENV180297035
OBJA01008089
349350
Thermodesulfobacteriota
GAC
Val
>WENV180296447
OBJA01000546
152132
Thermodesulfobacteriota
CAT
Met
>WENV180296592
OBJA01001040
45804
Thermodesulfobacteriota
CGA
Ser
>WENV180297309
OBJA01020855
80747
Thermodesulfobacteriota
GTA
Tyr
>WENV180298455
OBJA01354204
99325
Thermodesulfobacteriota
GTA
Tyr
>WENV180297421
OBJA01030310
132099
Thermodesulfobacteriota
GAT
Ile
>WENV180297533
OBJA01041988
243213
Thermodesulfobacteriota
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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