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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180356592
OBNL01000034
146962
Bacteroidota
CAT
Met
>WENV180356587
OBNL01000019
243344
Bacteroidota
TCC
Gly
>WENV180356593
OBNL01000034
243344
Bacteroidota
TCC
Gly
>WENV180356707
OBNL01011164
338625
Bacteroidota
TTC
Glu
>WENV180356600
OBNL01000151
236125
Bacteroidota
GAA
Phe
>WENV180356582
OBNL01000016
60611
Bacteroidota
GCT
Ser
>WENV180356581
OBNL01000011
146800
Bacteroidota
>WENV180356586
OBNL01000019
96418
Bacteroidota
GTA
Tyr
>WENV180356602
OBNL01000216
127288
Bacteroidota
TGG
Pro
>WENV180356583
OBNL01000016
127288
Bacteroidota
TGG
Pro
>WENV180356601
OBNL01000169
412944
Bacteroidota
GCA
Cys
>WENV180356682
OBNL01007735
242524
Bacteroidota
GCC
Gly
>WENV180356578
OBNL01000008
341187
Bacteroidota
TTG
Gln
>WENV180356589
OBNL01000019
341421
Bacteroidota
CCA
Trp
>WENV180356595
OBNL01000069
240684
Bacteroidota
TTT
Lys
>WENV180356576
OBNL01000002
240684
Bacteroidota
TTT
Lys
>WENV180356603
OBNL01000237
145555
Bacteroidota
GTC
Asp
>WENV180356612
OBNL01000720
153768
Bacteroidota
TGC
Ala
>WENV180356599
OBNL01000117
341465
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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