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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180356884
OBNL01063712
58767
Gammaproteobacteria
CAG
Leu
>WENV180356759
OBNL01018611
238941
Gammaproteobacteria
>WENV180356679
OBNL01007254
95866
Gammaproteobacteria
GTA
Tyr
>WENV180356711
OBNL01011531
149578
Gammaproteobacteria
ACG
Arg
>WENV180356625
OBNL01001696
45345
Gammaproteobacteria
GGA
Ser
>WENV180356850
OBNL01053438
238307
Gammaproteobacteria
GAA
Phe
>WENV180356781
OBNL01025831
16396
Gammaproteobacteria
TGA
Ser
>WENV180356799
OBNL01030989
149661
Gammaproteobacteria
CAT
Met
>WENV180356779
OBNL01024745
16840
Gammaproteobacteria
GGA
Ser
>WENV180356887
OBNL01064772
240536
Gammaproteobacteria
TTT
Lys
>WENV180356895
OBNL01069639
147776
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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