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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180397071
OBPX01004323
366531
Cyanobacteriota
TTG
Gln
>WENV180397174
OBPX01018183
144929
Cyanobacteriota
CAT
Met
>WENV180397040
OBPX01002144
164907
Cyanobacteriota
GGG
Pro
>WENV180397207
OBPX01022934
339686
Cyanobacteriota
TAC
Val
>WENV180397022
OBPX01001098
37357
Cyanobacteriota
TAA
Leu
>WENV180397010
OBPX01000647
149253
Cyanobacteriota
ACG
Arg
>WENV180397278
OBPX01044057
23668
Cyanobacteriota
TGA
Ser
>WENV180397108
OBPX01008137
363933
Cyanobacteriota
GTT
Asn
>WENV180397086
OBPX01005930
237899
Cyanobacteriota
CCA
Trp
>WENV180397009
OBPX01000626
23971
Cyanobacteriota
TGA
Ser
>WENV180396992
OBPX01000195
411836
Cyanobacteriota
TCC
Gly
>WENV180397079
OBPX01005509
11030
Cyanobacteriota
GCT
Ser
>WENV180397253
OBPX01033758
240100
Cyanobacteriota
CAT
Met
>WENV180397076
OBPX01004925
95762
Cyanobacteriota
AAG
Leu
>WENV180397043
OBPX01002375
188100
Cyanobacteriota
CCG
Arg
>WENV180397294
OBPX01049376
147238
Cyanobacteriota
CCG
Arg
>WENV180397103
OBPX01007438
341034
Cyanobacteriota
GGT
Thr
>WENV180397044
OBPX01002396
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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