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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180400039
OBRF01000043
235449
Gammaproteobacteria
>WENV180400074
OBRF01000308
235449
Gammaproteobacteria
>WENV180400035
OBRF01000023
6971
Gammaproteobacteria
GCT
Ser
>WENV180400052
OBRF01000083
144917
Gammaproteobacteria
>WENV180400053
OBRF01000084
144950
Gammaproteobacteria
GGG
Pro
>WENV180400040
OBRF01000044
114623
Gammaproteobacteria
GAG
Leu
>WENV180400067
OBRF01000266
95726
Gammaproteobacteria
>WENV180400070
OBRF01000267
95726
Gammaproteobacteria
>WENV180400072
OBRF01000267
95726
Gammaproteobacteria
>WENV180400077
OBRF01000415
95726
Gammaproteobacteria
>WENV180400037
OBRF01000023
7730
Gammaproteobacteria
GCT
Ser
>WENV180400062
OBRF01000170
250266
Gammaproteobacteria
GTT
Asn
>WENV180400033
OBRF01000020
411729
Gammaproteobacteria
>WENV180400083
OBRF01000447
235488
Gammaproteobacteria
TAC
Val
>WENV180400080
OBRF01000422
99315
Gammaproteobacteria
>WENV180400064
OBRF01000215
99315
Gammaproteobacteria
>WENV180400079
OBRF01000415
80691
Gammaproteobacteria
CAG
Leu
>WENV180400066
OBRF01000266
80691
Gammaproteobacteria
CAG
Leu
>WENV180400082
OBRF01000447
339614
Gammaproteobacteria
TTT
Lys
>WENV180400085
OBRF01000593
236119
Gammaproteobacteria
GGT
Thr
>WENV180400061
OBRF01000162
95725
Gammaproteobacteria
CAA
Leu
>WENV180400055
OBRF01000104
44883
Gammaproteobacteria
GGA
Ser
>WENV180400071
OBRF01000267
343593
Gammaproteobacteria
>WENV180400068
OBRF01000266
343593
Gammaproteobacteria
>WENV180400086
OBRF01000597
145320
Gammaproteobacteria
ACG
Arg
>WENV180400036
OBRF01000023
145320
Gammaproteobacteria
ACG
Arg
>WENV180400060
OBRF01000153
238714
Gammaproteobacteria
GTT
Asn
>WENV180400043
OBRF01000048
235317
Gammaproteobacteria
GGT
Thr
>WENV180400050
OBRF01000072
145548
Gammaproteobacteria
TCT
Arg
>WENV180400075
OBRF01000308
58760
Gammaproteobacteria
>WENV180400032
OBRF01000020
58760
Gammaproteobacteria
>WENV180400076
OBRF01000415
338678
Gammaproteobacteria
>WENV180400054
OBRF01000084
16250
Gammaproteobacteria
TGA
Ser
>WENV180400049
OBRF01000070
147159
Gammaproteobacteria
>WENV180400034
OBRF01000023
236117
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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