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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180400031
OBRF01000017
210874
Gammaproteobacteria
TGG
Pro
>WENV180400032
OBRF01000020
64782
Gammaproteobacteria
>WENV180400034
OBRF01000023
257830
Gammaproteobacteria
>WENV180400035
OBRF01000023
10025
Gammaproteobacteria
>WENV180400036
OBRF01000023
159115
Gammaproteobacteria
ACG
Arg
>WENV180400037
OBRF01000023
10025
Gammaproteobacteria
>WENV180400039
OBRF01000043
256943
Gammaproteobacteria
>WENV180400040
OBRF01000044
124723
Gammaproteobacteria
GAG
Leu
>WENV180400043
OBRF01000048
256948
Gammaproteobacteria
GGT
Thr
>WENV180400045
OBRF01000049
210874
Gammaproteobacteria
TGG
Pro
>WENV180400050
OBRF01000072
159114
Gammaproteobacteria
TCT
Arg
>WENV180400053
OBRF01000084
158860
Gammaproteobacteria
GGG
Pro
>WENV180400054
OBRF01000084
18284
Gammaproteobacteria
TGA
Ser
>WENV180400055
OBRF01000104
49679
Gammaproteobacteria
GGA
Ser
>WENV180400060
OBRF01000153
262469
Gammaproteobacteria
GTT
Asn
>WENV180400061
OBRF01000162
105183
Gammaproteobacteria
CAA
Leu
>WENV180400062
OBRF01000170
286491
Gammaproteobacteria
GTT
Asn
>WENV180400064
OBRF01000215
105039
Gammaproteobacteria
>WENV180400066
OBRF01000266
88703
Gammaproteobacteria
CAG
Leu
>WENV180400067
OBRF01000266
105184
Gammaproteobacteria
>WENV180400068
OBRF01000266
369305
Gammaproteobacteria
>WENV180400070
OBRF01000267
105184
Gammaproteobacteria
>WENV180400071
OBRF01000267
369305
Gammaproteobacteria
>WENV180400072
OBRF01000267
105184
Gammaproteobacteria
>WENV180400074
OBRF01000308
256943
Gammaproteobacteria
>WENV180400075
OBRF01000308
64782
Gammaproteobacteria
>WENV180400076
OBRF01000415
369422
Gammaproteobacteria
>WENV180400077
OBRF01000415
105184
Gammaproteobacteria
>WENV180400079
OBRF01000415
88703
Gammaproteobacteria
CAG
Leu
>WENV180400080
OBRF01000422
105039
Gammaproteobacteria
>WENV180400082
OBRF01000447
369423
Gammaproteobacteria
TTT
Lys
>WENV180400083
OBRF01000447
258063
Gammaproteobacteria
TAC
Val
>WENV180400086
OBRF01000597
159115
Gammaproteobacteria
ACG
Arg
>WENV180400087
OBRF01000912
170929
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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