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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180463057
OBYC01000134
235097
Bacteroidota
TTT
Lys
>WENV180462878
OBYC01000008
235102
Bacteroidota
CGT
Thr
>WENV180462894
OBYC01000013
338155
Bacteroidota
CTC
Glu
>WENV180462896
OBYC01000017
436206
Bacteroidota
TTG
Gln
>WENV180463354
OBYC01000643
436206
Bacteroidota
TTG
Gln
>WENV180462984
OBYC01000077
338124
Bacteroidota
CCG
Arg
>WENV180463038
OBYC01000116
338132
Bacteroidota
GCA
Cys
>WENV180463388
OBYC01000746
338132
Bacteroidota
GCA
Cys
>WENV180463205
OBYC01000367
193809
Bacteroidota
CAT
Met
>WENV180463724
OBYC01020885
301449
Bacteroidota
CGG
Pro
>WENV180462916
OBYC01000028
301449
Bacteroidota
CGG
Pro
>WENV180462847
OBYC01000001
301449
Bacteroidota
CGG
Pro
>WENV180463138
OBYC01000251
144656
Bacteroidota
GTG
His
>WENV180463159
OBYC01000293
235207
Bacteroidota
CAT
Met
>WENV180463042
OBYC01000120
144596
Bacteroidota
GGC
Ala
>WENV180463003
OBYC01000086
80607
Bacteroidota
GTA
Tyr
>WENV180462998
OBYC01000085
80607
Bacteroidota
GTA
Tyr
>WENV180462908
OBYC01000025
80607
Bacteroidota
GTA
Tyr
>WENV180463285
OBYC01000465
113604
Bacteroidota
>WENV180463002
OBYC01000085
144590
Bacteroidota
GTT
Asn
>WENV180463001
OBYC01000085
144590
Bacteroidota
GTT
Asn
>WENV180463101
OBYC01000198
95559
Bacteroidota
TAG
Leu
>WENV180463031
OBYC01000111
419272
Bacteroidota
CTG
Gln
>WENV180462978
OBYC01000067
144655
Bacteroidota
GGC
Ala
>WENV180463030
OBYC01000111
139743
Bacteroidota
GGG
Pro
>WENV180462890
OBYC01000012
139743
Bacteroidota
GGG
Pro
>WENV180462910
OBYC01000026
44852
Bacteroidota
TAA
Leu
>WENV180462874
OBYC01000007
338165
Bacteroidota
GGT
Thr
>WENV180462902
OBYC01000022
19528
Bacteroidota
GGA
Ser
>WENV180462889
OBYC01000012
425638
Bacteroidota
CTG
Gln
>WENV180462912
OBYC01000027
425638
Bacteroidota
CTG
Gln
>WENV180462893
OBYC01000013
23696
Bacteroidota
GCT
Ser
>WENV180463062
OBYC01000139
55270
Bacteroidota
TGA
Ser
>WENV180463022
OBYC01000106
55270
Bacteroidota
TGA
Ser
>WENV180462901
OBYC01000022
55270
Bacteroidota
TGA
Ser
>WENV180462900
OBYC01000022
55270
Bacteroidota
TGA
Ser
>WENV180462899
OBYC01000021
16224
Bacteroidota
GGA
Ser
>WENV180463052
OBYC01000132
16220
Bacteroidota
GGA
Ser
>WENV180462911
OBYC01000026
338125
Bacteroidota
CCT
Arg
>WENV180462870
OBYC01000007
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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