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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180504120
OCAN01000503
235097
Bacteroidota
TTT
Lys
>WENV180504363
OCAN01001848
235097
Bacteroidota
TTT
Lys
>WENV180504676
OCAN01029233
235102
Bacteroidota
CGT
Thr
>WENV180503871
OCAN01000102
267954
Bacteroidota
GCC
Gly
>WENV180504128
OCAN01000530
267954
Bacteroidota
GCC
Gly
>WENV180504420
OCAN01002590
243025
Bacteroidota
CAT
Met
>WENV180503732
OCAN01000022
338155
Bacteroidota
CTC
Glu
>WENV180503779
OCAN01000052
338155
Bacteroidota
CTC
Glu
>WENV180503829
OCAN01000073
338155
Bacteroidota
CTC
Glu
>WENV180503772
OCAN01000048
150845
Bacteroidota
GTC
Asp
>WENV180504470
OCAN01003647
153993
Bacteroidota
GAT
Ile
>WENV180504683
OCAN01031667
46165
Bacteroidota
TGA
Ser
>WENV180504453
OCAN01003107
17323
Bacteroidota
GGA
Ser
>WENV180503709
OCAN01000014
95618
Bacteroidota
TAG
Leu
>WENV180504634
OCAN01017909
338486
Bacteroidota
CAT
Met
>WENV180504739
OCAN01058159
48053
Bacteroidota
TGA
Ser
>WENV180504442
OCAN01002944
48053
Bacteroidota
TGA
Ser
>WENV180504222
OCAN01000923
48053
Bacteroidota
TGA
Ser
>WENV180504219
OCAN01000912
48053
Bacteroidota
TGA
Ser
>WENV180504157
OCAN01000645
48053
Bacteroidota
TGA
Ser
>WENV180503980
OCAN01000243
48053
Bacteroidota
TGA
Ser
>WENV180503939
OCAN01000177
48053
Bacteroidota
TGA
Ser
>WENV180503809
OCAN01000065
48053
Bacteroidota
TGA
Ser
>WENV180503808
OCAN01000065
48053
Bacteroidota
TGA
Ser
>WENV180504336
OCAN01001649
415410
Bacteroidota
TTG
Gln
>WENV180503667
OCAN01000005
415410
Bacteroidota
TTG
Gln
>WENV180503735
OCAN01000024
411543
Bacteroidota
CTG
Gln
>WENV180504277
OCAN01001139
344692
Bacteroidota
GGT
Thr
>WENV180503903
OCAN01000150
235182
Bacteroidota
>WENV180504653
OCAN01023509
341950
Bacteroidota
>WENV180503748
OCAN01000033
338124
Bacteroidota
CCG
Arg
>WENV180504534
OCAN01005742
168744
Bacteroidota
GTG
His
>WENV180504349
OCAN01001736
168744
Bacteroidota
GTG
His
>WENV180504666
OCAN01026040
238121
Bacteroidota
CTT
Lys
>WENV180504072
OCAN01000425
126641
Bacteroidota
TAC
Val
>WENV180504071
OCAN01000425
126641
Bacteroidota
TAC
Val
>WENV180503984
OCAN01000248
126641
Bacteroidota
TAC
Val
>WENV180503869
OCAN01000100
126641
Bacteroidota
TAC
Val
>WENV180504386
OCAN01002181
338132
Bacteroidota
GCA
Cys
>WENV180504259
OCAN01001053
338132
Bacteroidota
GCA
Cys
>WENV180504170
OCAN01000700
338132
Bacteroidota
GCA
Cys
>WENV180504099
OCAN01000474
338132
Bacteroidota
GCA
Cys
>WENV180503768
OCAN01000045
338132
Bacteroidota
GCA
Cys
>WENV180503943
OCAN01000182
144688
Bacteroidota
CAT
Met
>WENV180503917
OCAN01000157
144933
Bacteroidota
TCT
Arg
>WENV180503826
OCAN01000072
144933
Bacteroidota
TCT
Arg
>WENV180503673
OCAN01000007
144933
Bacteroidota
TCT
Arg
>WENV180503848
OCAN01000090
144656
Bacteroidota
GTG
His
>WENV180504018
OCAN01000314
235207
Bacteroidota
CAT
Met
>WENV180503981
OCAN01000244
235207
Bacteroidota
CAT
Met
>WENV180504518
OCAN01004743
144659
Bacteroidota
GTG
His
>WENV180504595
OCAN01010910
235180
Bacteroidota
CCA
Trp
>WENV180504131
OCAN01000541
144596
Bacteroidota
GGC
Ala
>WENV180503684
OCAN01000011
144596
Bacteroidota
GGC
Ala
>WENV180504296
OCAN01001352
80607
Bacteroidota
GTA
Tyr
>WENV180504285
OCAN01001274
80607
Bacteroidota
GTA
Tyr
>WENV180504036
OCAN01000363
80607
Bacteroidota
GTA
Tyr
>WENV180503733
OCAN01000023
80607
Bacteroidota
GTA
Tyr
>WENV180503680
OCAN01000010
80607
Bacteroidota
GTA
Tyr
>WENV180503666
OCAN01000004
80607
Bacteroidota
GTA
Tyr
>WENV180504274
OCAN01001118
113604
Bacteroidota
>WENV180504271
OCAN01001118
113604
Bacteroidota
>WENV180504648
OCAN01021181
80614
Bacteroidota
>WENV180504443
OCAN01002960
154643
Bacteroidota
CAT
Met
>WENV180504744
OCAN01058329
144590
Bacteroidota
GTT
Asn
>WENV180503969
OCAN01000227
95559
Bacteroidota
TAG
Leu
>WENV180503743
OCAN01000030
419272
Bacteroidota
CTG
Gln
>WENV180503894
OCAN01000146
144655
Bacteroidota
GGC
Ala
>WENV180504522
OCAN01005117
95875
Bacteroidota
TAG
Leu
>WENV180504017
OCAN01000312
151121
Bacteroidota
CAT
Met
>WENV180504180
OCAN01000733
44852
Bacteroidota
TAA
Leu
>WENV180504508
OCAN01004463
147439
Bacteroidota
TCT
Arg
>WENV180504572
OCAN01008271
411550
Bacteroidota
CTG
Gln
>WENV180504737
OCAN01057618
338165
Bacteroidota
GGT
Thr
>WENV180504000
OCAN01000283
338165
Bacteroidota
GGT
Thr
>WENV180504299
OCAN01001382
414426
Bacteroidota
CTG
Gln
>WENV180503849
OCAN01000090
16224
Bacteroidota
GGA
Ser
>WENV180503744
OCAN01000030
16220
Bacteroidota
GGA
Ser
>WENV180504738
OCAN01058120
338125
Bacteroidota
CCT
Arg
>WENV180503880
OCAN01000114
338125
Bacteroidota
CCT
Arg
>WENV180504626
OCAN01015891
235129
Bacteroidota
GCC
Gly
>WENV180504722
OCAN01051620
411629
Bacteroidota
TTG
Gln
>WENV180503776
OCAN01000050
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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