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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180559301
OCKC01000030
235507
Bacillota
GAA
Phe
>WENV180559306
OCKC01000034
235507
Bacillota
GAA
Phe
>WENV180559444
OCKC01000152
235507
Bacillota
GAA
Phe
>WENV180559463
OCKC01000168
235507
Bacillota
GAA
Phe
>WENV180559438
OCKC01000130
37110
Bacillota
TAA
Leu
>WENV180559484
OCKC01000222
146699
Bacillota
TCG
Arg
>WENV180559360
OCKC01000063
80838
Bacillota
GTA
Tyr
>WENV180559493
OCKC01000294
80838
Bacillota
GTA
Tyr
>WENV180559478
OCKC01000207
37089
Bacillota
TAA
Leu
>WENV180559431
OCKC01000120
146697
Bacillota
ACG
Arg
>WENV180559492
OCKC01000294
237285
Bacillota
TGT
Thr
>WENV180559359
OCKC01000063
237285
Bacillota
TGT
Thr
>WENV180559338
OCKC01000043
237285
Bacillota
TGT
Thr
>WENV180559498
OCKC01000345
237286
Bacillota
CTT
Lys
>WENV180559487
OCKC01000241
237286
Bacillota
CTT
Lys
>WENV180559502
OCKC01000362
243346
Bacillota
TGC
Ala
>WENV180559546
OCKC01003998
154766
Bacillota
GTC
Asp
>WENV180559382
OCKC01000081
113680
Bacillota
TAG
Leu
>WENV180559430
OCKC01000120
16285
Bacillota
GCT
Ser
>WENV180559428
OCKC01000120
16285
Bacillota
GCT
Ser
>WENV180559458
OCKC01000164
413601
Bacillota
GCA
Cys
>WENV180559561
OCKC01005622
412107
Bacillota
TCC
Gly
>WENV180559555
OCKC01005450
412107
Bacillota
TCC
Gly
>WENV180559501
OCKC01000345
412107
Bacillota
TCC
Gly
>WENV180559483
OCKC01000222
412107
Bacillota
TCC
Gly
>WENV180559421
OCKC01000116
412107
Bacillota
TCC
Gly
>WENV180559305
OCKC01000034
80839
Bacillota
GAG
Leu
>WENV180559539
OCKC01003443
145606
Bacillota
GTC
Asp
>WENV180559462
OCKC01000168
338550
Bacillota
>WENV180559477
OCKC01000207
146698
Bacillota
CAT
Met
>WENV180559526
OCKC01001978
338439
Bacillota
GCC
Gly
>WENV180559553
OCKC01005426
339364
Bacillota
TTG
Gln
>WENV180559500
OCKC01000345
339364
Bacillota
TTG
Gln
>WENV180559495
OCKC01000297
339362
Bacillota
GTT
Asn
>WENV180559479
OCKC01000207
339362
Bacillota
GTT
Asn
>WENV180559437
OCKC01000127
339362
Bacillota
GTT
Asn
>WENV180559309
OCKC01000037
146741
Bacillota
CAT
Met
>WENV180559556
OCKC01005499
339363
Bacillota
GCC
Gly
>WENV180559550
OCKC01005101
339363
Bacillota
GCC
Gly
>WENV180559549
OCKC01004444
339363
Bacillota
GCC
Gly
>WENV180559310
OCKC01000037
147961
Bacillota
CAT
Met
>WENV180559423
OCKC01000116
237287
Bacillota
GTG
His
>WENV180559405
OCKC01000098
59079
Bacillota
CAA
Leu
>WENV180559538
OCKC01003443
237284
Bacillota
TAC
Val
>WENV180559494
OCKC01000294
237284
Bacillota
TAC
Val
>WENV180559433
OCKC01000120
23575
Bacillota
GGA
Ser
>WENV180559551
OCKC01005355
145469
Bacillota
TCT
Arg
>WENV180559499
OCKC01000345
145469
Bacillota
TCT
Arg
>WENV180559422
OCKC01000116
145469
Bacillota
TCT
Arg
>WENV180559452
OCKC01000164
237681
Bacillota
GTC
Asp
>WENV180559429
OCKC01000120
16361
Bacillota
TGA
Ser
>WENV180559427
OCKC01000120
16361
Bacillota
TGA
Ser
>WENV180559537
OCKC01003443
338545
Bacillota
>WENV180559482
OCKC01000215
338545
Bacillota
>WENV180559362
OCKC01000063
237288
Bacillota
CCA
Trp
>WENV180559361
OCKC01000063
237288
Bacillota
CCA
Trp
>WENV180559432
OCKC01000120
339361
Bacillota
CCT
Arg
>WENV180559453
OCKC01000164
237348
Bacillota
GAA
Phe
>WENV180559554
OCKC01005426
237283
Bacillota
TTT
Lys
>WENV180559545
OCKC01003983
237283
Bacillota
TTT
Lys
>WENV180559497
OCKC01000321
237283
Bacillota
TTT
Lys
>WENV180559496
OCKC01000320
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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