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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570590
OCLS01000286
237201
Alphaproteobacteria
CAT
Met
>WENV180570746
OCLS01000472
254525
Alphaproteobacteria
CCT
Arg
>WENV180570410
OCLS01000090
339325
Alphaproteobacteria
CAC
Val
>WENV180570797
OCLS01000593
350557
Alphaproteobacteria
TTT
Lys
>WENV180570443
OCLS01000119
338282
Alphaproteobacteria
GTT
Asn
>WENV180570548
OCLS01000236
350556
Alphaproteobacteria
TGT
Thr
>WENV180570454
OCLS01000124
340288
Alphaproteobacteria
GCC
Gly
>WENV180570442
OCLS01000119
340288
Alphaproteobacteria
GCC
Gly
>WENV180570769
OCLS01000535
23560
Alphaproteobacteria
CGA
Ser
>WENV180570455
OCLS01000124
145688
Alphaproteobacteria
TCT
Arg
>WENV180570291
OCLS01000031
296875
Alphaproteobacteria
CGC
Ala
>WENV180570621
OCLS01000320
286119
Alphaproteobacteria
GGC
Ala
>WENV180570737
OCLS01000468
338289
Alphaproteobacteria
GAC
Val
>WENV180570409
OCLS01000090
114625
Alphaproteobacteria
CAA
Leu
>WENV180570337
OCLS01000050
151730
Alphaproteobacteria
CCG
Arg
>WENV180570445
OCLS01000119
99048
Alphaproteobacteria
TAG
Leu
>WENV180570478
OCLS01000150
114626
Alphaproteobacteria
TAA
Leu
>WENV180570821
OCLS01000661
235427
Alphaproteobacteria
CCA
Trp
>WENV180570833
OCLS01000685
339884
Alphaproteobacteria
TTC
Glu
>WENV180570425
OCLS01000101
339884
Alphaproteobacteria
TTC
Glu
>WENV180570364
OCLS01000060
130084
Alphaproteobacteria
GGG
Pro
>WENV180570477
OCLS01000150
59164
Alphaproteobacteria
GAG
Leu
>WENV180570522
OCLS01000203
113673
Alphaproteobacteria
>WENV180570457
OCLS01000129
237196
Alphaproteobacteria
CGT
Thr
>WENV180570338
OCLS01000050
366499
Alphaproteobacteria
GGT
Thr
>WENV180570444
OCLS01000119
23384
Alphaproteobacteria
GGA
Ser
>WENV180570339
OCLS01000050
146626
Alphaproteobacteria
GTG
His
>WENV180570288
OCLS01000029
427621
Alphaproteobacteria
TCC
Gly
>WENV180570456
OCLS01000127
254524
Alphaproteobacteria
TAC
Val
>WENV180570854
OCLS01000768
23743
Alphaproteobacteria
GCT
Ser
>WENV180570578
OCLS01000266
184904
Alphaproteobacteria
ACG
Arg
>WENV180570840
OCLS01000716
25738
Alphaproteobacteria
TGA
Ser
>WENV180570292
OCLS01000031
174372
Alphaproteobacteria
CAT
Met
>WENV180570446
OCLS01000119
411617
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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