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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180571434
OCLT01000102
235097
Bacteroidota
TTT
Lys
>WENV180571458
OCLT01000117
235097
Bacteroidota
TTT
Lys
>WENV180571916
OCLT01000936
235102
Bacteroidota
CGT
Thr
>WENV180571675
OCLT01000302
415410
Bacteroidota
TTG
Gln
>WENV180571380
OCLT01000070
338124
Bacteroidota
CCG
Arg
>WENV180571789
OCLT01000502
338132
Bacteroidota
GCA
Cys
>WENV180571980
OCLT01001338
193809
Bacteroidota
CAT
Met
>WENV180571339
OCLT01000053
301449
Bacteroidota
CGG
Pro
>WENV180571388
OCLT01000074
144656
Bacteroidota
GTG
His
>WENV180571600
OCLT01000223
235207
Bacteroidota
CAT
Met
>WENV180571669
OCLT01000300
80607
Bacteroidota
GTA
Tyr
>WENV180571302
OCLT01000040
80607
Bacteroidota
GTA
Tyr
>WENV180571666
OCLT01000297
113604
Bacteroidota
>WENV180571663
OCLT01000297
113604
Bacteroidota
>WENV180571387
OCLT01000074
52358
Bacteroidota
TGA
Ser
>WENV180571304
OCLT01000040
52358
Bacteroidota
TGA
Ser
>WENV180571673
OCLT01000300
144590
Bacteroidota
GTT
Asn
>WENV180571672
OCLT01000300
144590
Bacteroidota
GTT
Asn
>WENV180571744
OCLT01000381
95559
Bacteroidota
TAG
Leu
>WENV180571507
OCLT01000147
419272
Bacteroidota
CTG
Gln
>WENV180571364
OCLT01000067
144655
Bacteroidota
GGC
Ala
>WENV180571684
OCLT01000311
44852
Bacteroidota
TAA
Leu
>WENV180571509
OCLT01000147
132360
Bacteroidota
GGG
Pro
>WENV180571389
OCLT01000074
16224
Bacteroidota
GGA
Ser
>WENV180571508
OCLT01000147
16220
Bacteroidota
GGA
Ser
>WENV180571319
OCLT01000048
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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