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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180616105
OCQA01000002
119661
Verrucomicrobiota
CAA
Leu
>WENV180616136
OCQA01000007
155256
Verrucomicrobiota
TCT
Arg
>WENV180616135
OCQA01000007
246701
Verrucomicrobiota
TTT
Lys
>WENV180616138
OCQA01000008
345141
Verrucomicrobiota
TTG
Gln
>WENV180616140
OCQA01000008
345133
Verrucomicrobiota
GAC
Val
>WENV180616356
OCQA01000100
82054
Verrucomicrobiota
GTA
Tyr
>WENV180616392
OCQA01000126
246677
Verrucomicrobiota
CTT
Lys
>WENV180616391
OCQA01000126
246677
Verrucomicrobiota
CTT
Lys
>WENV180616553
OCQA01000342
344844
Verrucomicrobiota
GCA
Cys
>WENV180616107
OCQA01000002
155264
Verrucomicrobiota
GGG
Pro
>WENV180616139
OCQA01000008
344845
Verrucomicrobiota
CTG
Gln
>WENV180616521
OCQA01000272
128202
Verrucomicrobiota
GTC
Asp
>WENV180616141
OCQA01000008
128202
Verrucomicrobiota
GTC
Asp
>WENV180616108
OCQA01000002
414625
Verrucomicrobiota
CCC
Gly
>WENV180616547
OCQA01000336
46246
Verrucomicrobiota
TGA
Ser
>WENV180616456
OCQA01000182
246700
Verrucomicrobiota
TTC
Glu
>WENV180616306
OCQA01000072
246700
Verrucomicrobiota
TTC
Glu
>WENV180616303
OCQA01000072
246700
Verrucomicrobiota
TTC
Glu
>WENV180616305
OCQA01000072
246687
Verrucomicrobiota
CGC
Ala
>WENV180616097
OCQA01000002
419909
Verrucomicrobiota
TCC
Gly
>WENV180616143
OCQA01000008
344841
Verrucomicrobiota
CAC
Val
>WENV180616307
OCQA01000074
60880
Verrucomicrobiota
CAG
Leu
>WENV180616101
OCQA01000002
82056
Verrucomicrobiota
TAA
Leu
>WENV180616390
OCQA01000126
344842
Verrucomicrobiota
CGT
Thr
>WENV180616692
OCQA01000631
170105
Verrucomicrobiota
CAT
Met
>WENV180616352
OCQA01000097
287733
Verrucomicrobiota
CCA
Trp
>WENV180616304
OCQA01000072
345123
Verrucomicrobiota
TGT
Thr
>WENV180616100
OCQA01000002
345110
Verrucomicrobiota
CCT
Arg
>WENV180616457
OCQA01000182
344839
Verrucomicrobiota
GTG
His
>WENV180616496
OCQA01000230
7274
Verrucomicrobiota
CGA
Ser
>WENV180616102
OCQA01000002
246260
Verrucomicrobiota
>WENV180616389
OCQA01000126
155268
Verrucomicrobiota
CGG
Pro
>WENV180616552
OCQA01000342
82181
Verrucomicrobiota
AAG
Leu
>WENV180616098
OCQA01000002
246728
Verrucomicrobiota
GAA
Phe
>WENV180616103
OCQA01000002
7256
Verrucomicrobiota
GCT
Ser
>WENV180616459
OCQA01000182
345115
Verrucomicrobiota
CAT
Met
>WENV180616340
OCQA01000093
345119
Verrucomicrobiota
TAC
Val
>WENV180616355
OCQA01000100
345124
Verrucomicrobiota
GTT
Asn
>WENV180616520
OCQA01000272
17023
Verrucomicrobiota
GGA
Ser
>WENV180616455
OCQA01000182
368497
Verrucomicrobiota
GCC
Gly
>WENV180616137
OCQA01000008
368497
Verrucomicrobiota
GCC
Gly
>WENV180616109
OCQA01000002
345142
Verrucomicrobiota
CCG
Arg
>WENV180616458
OCQA01000182
246709
Verrucomicrobiota
CAT
Met
>WENV180616099
OCQA01000002
154693
Verrucomicrobiota
TGG
Pro
>WENV180616351
OCQA01000097
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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