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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180689126
OCZA010541700
165001
Bacteroidota
GTT
Asn
>WENV180687408
OCZA010004950
306609
Bacteroidota
GAA
Phe
>WENV180687937
OCZA010032639
306609
Bacteroidota
GAA
Phe
>WENV180688415
OCZA010116545
387331
Bacteroidota
CCT
Arg
>WENV180687892
OCZA010028520
241019
Bacteroidota
CAT
Met
>WENV180688328
OCZA010088940
338625
Bacteroidota
TTC
Glu
>WENV180686988
OCZA010000229
236125
Bacteroidota
GAA
Phe
>WENV180688461
OCZA010125275
127458
Bacteroidota
GAC
Val
>WENV180688787
OCZA010275447
364423
Bacteroidota
GGT
Thr
>WENV180687441
OCZA010005479
270933
Bacteroidota
CAT
Met
>WENV180688547
OCZA010155894
60611
Bacteroidota
GCT
Ser
>WENV180687796
OCZA010021268
60611
Bacteroidota
GCT
Ser
>WENV180689492
OCZA010980611
96678
Bacteroidota
TAG
Leu
>WENV180688161
OCZA010060637
96678
Bacteroidota
TAG
Leu
>WENV180687909
OCZA010029664
37569
Bacteroidota
TAA
Leu
>WENV180688240
OCZA010073139
273242
Bacteroidota
CCA
Trp
>WENV180689386
OCZA010853283
60695
Bacteroidota
GCT
Ser
>WENV180687891
OCZA010028337
60695
Bacteroidota
GCT
Ser
>WENV180688040
OCZA010044671
127414
Bacteroidota
TGG
Pro
>WENV180687735
OCZA010017688
127414
Bacteroidota
TGG
Pro
>WENV180687507
OCZA010007259
127414
Bacteroidota
TGG
Pro
>WENV180687363
OCZA010004170
127414
Bacteroidota
TGG
Pro
>WENV180688579
OCZA010170450
242524
Bacteroidota
GCC
Gly
>WENV180687740
OCZA010017771
190649
Bacteroidota
GTT
Asn
>WENV180687227
OCZA010002059
190649
Bacteroidota
GTT
Asn
>WENV180687099
OCZA010000870
190649
Bacteroidota
GTT
Asn
>WENV180688165
OCZA010060974
17987
Bacteroidota
GGA
Ser
>WENV180687248
OCZA010002271
290994
Bacteroidota
CAT
Met
>WENV180688725
OCZA010239077
159518
Bacteroidota
GAT
Ile
>WENV180687606
OCZA010010963
17496
Bacteroidota
GGA
Ser
>WENV180689379
OCZA010830894
80676
Bacteroidota
GTA
Tyr
>WENV180687074
OCZA010000674
240684
Bacteroidota
TTT
Lys
>WENV180688518
OCZA010141617
199382
Bacteroidota
GTT
Asn
>WENV180687829
OCZA010023730
145555
Bacteroidota
GTC
Asp
>WENV180687865
OCZA010025561
185921
Bacteroidota
GTC
Asp
>WENV180689600
OCZA011078923
193473
Bacteroidota
GTC
Asp
>WENV180688907
OCZA010352606
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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