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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180697489
ODDE01000881
97609
Betaproteobacteria
CAA
Leu
>WENV180697696
ODDE01003038
239294
Betaproteobacteria
GCC
Gly
>WENV180698079
ODDE01029496
239294
Betaproteobacteria
GCC
Gly
>WENV180698235
ODDE01103189
239294
Betaproteobacteria
GCC
Gly
>WENV180697370
ODDE01000134
62536
Betaproteobacteria
CAG
Leu
>WENV180697409
ODDE01000287
62536
Betaproteobacteria
CAG
Leu
>WENV180698080
ODDE01029496
412095
Betaproteobacteria
GCA
Cys
>WENV180697438
ODDE01000417
235250
Betaproteobacteria
>WENV180697866
ODDE01007901
235250
Betaproteobacteria
>WENV180697867
ODDE01007901
235250
Betaproteobacteria
>WENV180698229
ODDE01101054
235250
Betaproteobacteria
>WENV180697580
ODDE01001591
149294
Betaproteobacteria
TCT
Arg
>WENV180697570
ODDE01001422
240188
Betaproteobacteria
GAA
Phe
>WENV180697364
ODDE01000091
155338
Betaproteobacteria
>WENV180697363
ODDE01000091
155338
Betaproteobacteria
>WENV180697719
ODDE01003301
16424
Betaproteobacteria
GGA
Ser
>WENV180697517
ODDE01000988
16424
Betaproteobacteria
GGA
Ser
>WENV180697938
ODDE01012060
246021
Betaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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