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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181066687
ODZI01000957
256200
Betaproteobacteria
CGT
Thr
>WENV181067078
ODZI01005884
155690
Betaproteobacteria
TCT
Arg
>WENV181066982
ODZI01004319
239294
Betaproteobacteria
GCC
Gly
>WENV181068327
ODZI01272808
239294
Betaproteobacteria
GCC
Gly
>WENV181068330
ODZI01273228
239294
Betaproteobacteria
GCC
Gly
>WENV181068348
ODZI01287154
239294
Betaproteobacteria
GCC
Gly
>WENV181067623
ODZI01031773
159509
Betaproteobacteria
CAT
Met
>WENV181067624
ODZI01031773
159509
Betaproteobacteria
CAT
Met
>WENV181067926
ODZI01075228
58732
Betaproteobacteria
CAG
Leu
>WENV181066924
ODZI01003478
62536
Betaproteobacteria
CAG
Leu
>WENV181068204
ODZI01172474
412288
Betaproteobacteria
GCA
Cys
>WENV181068346
ODZI01286955
235250
Betaproteobacteria
>WENV181068299
ODZI01264225
235250
Betaproteobacteria
>WENV181067802
ODZI01055891
235250
Betaproteobacteria
>WENV181067253
ODZI01010382
95890
Betaproteobacteria
CAA
Leu
>WENV181067186
ODZI01008754
240188
Betaproteobacteria
GAA
Phe
>WENV181067004
ODZI01004677
240188
Betaproteobacteria
GAA
Phe
>WENV181066975
ODZI01004255
240188
Betaproteobacteria
GAA
Phe
>WENV181066988
ODZI01004402
155338
Betaproteobacteria
>WENV181066987
ODZI01004402
155338
Betaproteobacteria
>WENV181066986
ODZI01004402
155338
Betaproteobacteria
>WENV181066970
ODZI01004135
352197
Betaproteobacteria
GGT
Thr
>WENV181068223
ODZI01191239
246021
Betaproteobacteria
GTT
Asn
>WENV181067876
ODZI01066368
246021
Betaproteobacteria
GTT
Asn
>WENV181067725
ODZI01045518
246021
Betaproteobacteria
GTT
Asn
>WENV181067602
ODZI01029578
246021
Betaproteobacteria
GTT
Asn
>WENV181068031
ODZI01102690
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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