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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181124670
OEFT01000515
413566
Actinomycetota
CCC
Gly
>WENV181124517
OEFT01000030
261773
Actinomycetota
CCT
Arg
>WENV181125473
OEFT01132674
149272
Actinomycetota
TTT
Lys
>WENV181124582
OEFT01000113
418439
Actinomycetota
TCC
Gly
>WENV181125019
OEFT01008670
418439
Actinomycetota
TCC
Gly
>WENV181125425
OEFT01100711
418439
Actinomycetota
TCC
Gly
>WENV181124592
OEFT01000127
161605
Actinomycetota
CAT
Met
>WENV181124872
OEFT01003844
161605
Actinomycetota
CAT
Met
>WENV181125028
OEFT01008821
241401
Actinomycetota
CCA
Trp
>WENV181125444
OEFT01114370
235610
Actinomycetota
TGT
Thr
>WENV181124618
OEFT01000228
150473
Actinomycetota
CTC
Glu
>WENV181124924
OEFT01005542
149271
Actinomycetota
CAT
Met
>WENV181124740
OEFT01001289
246015
Actinomycetota
GTG
His
>WENV181125471
OEFT01131040
44930
Actinomycetota
GGA
Ser
>WENV181125149
OEFT01016463
239204
Actinomycetota
CTT
Lys
>WENV181125076
OEFT01011925
239204
Actinomycetota
CTT
Lys
>WENV181124906
OEFT01004962
239204
Actinomycetota
CTT
Lys
>WENV181124644
OEFT01000319
148467
Actinomycetota
CAT
Met
>WENV181125426
OEFT01101860
246299
Actinomycetota
CTT
Lys
>WENV181124847
OEFT01003195
246299
Actinomycetota
CTT
Lys
>WENV181124846
OEFT01003195
246299
Actinomycetota
CTT
Lys
>WENV181124876
OEFT01003931
235388
Actinomycetota
GTG
His
>WENV181125243
OEFT01031412
246222
Actinomycetota
CCG
Arg
>WENV181125441
OEFT01112582
37359
Actinomycetota
>WENV181125350
OEFT01061002
152190
Actinomycetota
GAT
Ile
>WENV181125485
OEFT01139121
240121
Actinomycetota
CTC
Glu
>WENV181124689
OEFT01000710
162402
Actinomycetota
GGG
Pro
>WENV181124594
OEFT01000149
162402
Actinomycetota
GGG
Pro
>WENV181125379
OEFT01076695
58781
Actinomycetota
CAG
Leu
>WENV181125470
OEFT01130405
59716
Actinomycetota
CAG
Leu
>WENV181125264
OEFT01036256
59716
Actinomycetota
CAG
Leu
>WENV181125128
OEFT01013590
246365
Actinomycetota
ACG
Arg
>WENV181124709
OEFT01000919
246365
Actinomycetota
ACG
Arg
>WENV181124643
OEFT01000319
97120
Actinomycetota
GTA
Tyr
>WENV181125362
OEFT01069708
3306
Actinomycetota
TAT
Ile
>WENV181124537
OEFT01000045
235575
Actinomycetota
CTC
Glu
>WENV181125363
OEFT01069708
96368
Actinomycetota
TAA
Leu
>WENV181124720
OEFT01001028
236216
Actinomycetota
GGC
Ala
>WENV181125177
OEFT01019695
154637
Actinomycetota
CAA
Leu
>WENV181125086
OEFT01012541
412870
Actinomycetota
TCC
Gly
>WENV181124654
OEFT01000405
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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