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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181159053
OEIH01035747
97609
Betaproteobacteria
CAA
Leu
>WENV181158410
OEIH01001107
239294
Betaproteobacteria
GCC
Gly
>WENV181158820
OEIH01011697
239294
Betaproteobacteria
GCC
Gly
>WENV181159138
OEIH01062450
239294
Betaproteobacteria
GCC
Gly
>WENV181159376
OEIH01205357
239294
Betaproteobacteria
GCC
Gly
>WENV181159190
OEIH01082680
58732
Betaproteobacteria
CAG
Leu
>WENV181159326
OEIH01174468
412288
Betaproteobacteria
GCA
Cys
>WENV181158453
OEIH01001510
235250
Betaproteobacteria
>WENV181158454
OEIH01001510
235250
Betaproteobacteria
>WENV181158509
OEIH01002008
95890
Betaproteobacteria
CAA
Leu
>WENV181158350
OEIH01000560
245575
Betaproteobacteria
CGT
Thr
>WENV181158696
OEIH01006324
149294
Betaproteobacteria
TCT
Arg
>WENV181158818
OEIH01011524
240188
Betaproteobacteria
GAA
Phe
>WENV181158552
OEIH01002786
240188
Betaproteobacteria
GAA
Phe
>WENV181158616
OEIH01004270
340983
Betaproteobacteria
GGT
Thr
>WENV181158577
OEIH01003160
155338
Betaproteobacteria
>WENV181158576
OEIH01003160
155338
Betaproteobacteria
>WENV181158575
OEIH01003160
155338
Betaproteobacteria
>WENV181158604
OEIH01004009
16424
Betaproteobacteria
GGA
Ser
>WENV181158676
OEIH01005453
246021
Betaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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