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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181194316
OEQQ01000792
196621
Bacillota
GTC
Asp
>WENV181194413
OEQQ01004761
155958
Bacillota
GAT
Ile
>WENV181194513
OEQQ01013784
237957
Bacillota
GTT
Asn
>WENV181194553
OEQQ01020220
235134
Bacillota
GAA
Phe
>WENV181194273
OEQQ01000320
235098
Bacillota
GAC
Val
>WENV181194344
OEQQ01001569
44854
Bacillota
TGA
Ser
>WENV181194516
OEQQ01013784
238489
Bacillota
GTC
Asp
>WENV181194370
OEQQ01002335
144577
Bacillota
GAT
Ile
>WENV181194515
OEQQ01013784
302150
Bacillota
TAC
Val
>WENV181194495
OEQQ01011015
246023
Bacillota
TGC
Ala
>WENV181194442
OEQQ01006469
307003
Bacillota
TGC
Ala
>WENV181194352
OEQQ01001736
429429
Bacillota
CCA
Trp
>WENV181194307
OEQQ01000583
41154
Bacillota
TAA
Leu
>WENV181194356
OEQQ01001880
235117
Bacillota
TAC
Val
>WENV181194358
OEQQ01001921
274189
Bacillota
TGT
Thr
>WENV181194267
OEQQ01000244
235079
Bacillota
GAA
Phe
>WENV181194502
OEQQ01012127
316443
Bacillota
GTC
Asp
>WENV181194293
OEQQ01000452
338149
Bacillota
CTC
Glu
>WENV181194561
OEQQ01021967
176449
Bacillota
GTC
Asp
>WENV181194537
OEQQ01016698
37269
Bacillota
TGA
Ser
>WENV181194296
OEQQ01000462
287000
Bacillota
GTT
Asn
>WENV181194386
OEQQ01003254
413152
Bacillota
TCC
Gly
>WENV181194514
OEQQ01013784
390525
Bacillota
TTC
Glu
>WENV181194494
OEQQ01011015
201704
Bacillota
GAT
Ile
>WENV181194383
OEQQ01003075
152492
Bacillota
GGG
Pro
>WENV181194290
OEQQ01000443
144610
Bacillota
GTG
His
>WENV181194343
OEQQ01001548
411547
Bacillota
CTG
Gln
>WENV181194317
OEQQ01000792
235095
Bacillota
GGT
Thr
>WENV181194526
OEQQ01015170
59296
Bacillota
AAG
Leu
>WENV181194563
OEQQ01021967
85288
Bacillota
GTA
Tyr
>WENV181194565
OEQQ01021967
240193
Bacillota
GTG
His
>WENV181194472
OEQQ01009332
298639
Bacillota
GTT
Asn
>WENV181194576
OEQQ01024520
240191
Bacillota
GGT
Thr
>WENV181194375
OEQQ01002574
235124
Bacillota
TGG
Pro
>WENV181194367
OEQQ01002290
338129
Bacillota
TGT
Thr
>WENV181194271
OEQQ01000268
144583
Bacillota
ACG
Arg
>WENV181194399
OEQQ01003741
140284
Bacillota
GAT
Ile
>WENV181194315
OEQQ01000792
235171
Bacillota
CCA
Trp
>WENV181194294
OEQQ01000452
144621
Bacillota
GTT
Asn
>WENV181194313
OEQQ01000770
58712
Bacillota
CAG
Leu
>WENV181194280
OEQQ01000398
58712
Bacillota
CAG
Leu
>WENV181194444
OEQQ01006559
21693
Bacillota
GCT
Ser
>WENV181194456
OEQQ01007546
272992
Bacillota
CTT
Lys
>WENV181194323
OEQQ01000886
144594
Bacillota
CAC
Val
>WENV181194566
OEQQ01021967
375269
Bacillota
TTG
Gln
>WENV181194564
OEQQ01021967
412118
Bacillota
>WENV181194522
OEQQ01014421
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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