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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181195833
OEQV01000226
144789
Gammaproteobacteria
GGG
Pro
>WENV181195872
OEQV01000519
144789
Gammaproteobacteria
GGG
Pro
>WENV181195779
OEQV01000011
146612
Gammaproteobacteria
CCT
Arg
>WENV181195799
OEQV01000059
144784
Gammaproteobacteria
CAT
Met
>WENV181195849
OEQV01000326
144790
Gammaproteobacteria
CGG
Pro
>WENV181195959
OEQV01005281
338240
Gammaproteobacteria
>WENV181195800
OEQV01000059
113614
Gammaproteobacteria
TAG
Leu
>WENV181195853
OEQV01000340
6883
Gammaproteobacteria
GCT
Ser
>WENV181195854
OEQV01000340
144788
Gammaproteobacteria
>WENV181195788
OEQV01000025
162284
Gammaproteobacteria
CCA
Trp
>WENV181195817
OEQV01000126
307499
Gammaproteobacteria
GAA
Phe
>WENV181195852
OEQV01000332
52727
Gammaproteobacteria
GGA
Ser
>WENV181195838
OEQV01000234
144793
Gammaproteobacteria
GAC
Val
>WENV181195789
OEQV01000027
148441
Gammaproteobacteria
TGG
Pro
>WENV181195960
OEQV01005281
236050
Gammaproteobacteria
TGT
Thr
>WENV181195825
OEQV01000174
237174
Gammaproteobacteria
CGT
Thr
>WENV181195848
OEQV01000315
235317
Gammaproteobacteria
GGT
Thr
>WENV181195837
OEQV01000234
144792
Gammaproteobacteria
GAC
Val
>WENV181195896
OEQV01001142
83458
Gammaproteobacteria
CAG
Leu
>WENV181195878
OEQV01000654
146661
Gammaproteobacteria
CAT
Met
>WENV181195839
OEQV01000234
235313
Gammaproteobacteria
GTT
Asn
>WENV181195803
OEQV01000071
152286
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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