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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181201400
OERN01010111
338634
Gammaproteobacteria
GCC
Gly
>WENV181201209
OERN01000011
144789
Gammaproteobacteria
GGG
Pro
>WENV181201233
OERN01000045
144789
Gammaproteobacteria
GGG
Pro
>WENV181201239
OERN01000063
340342
Gammaproteobacteria
TTG
Gln
>WENV181201252
OERN01000104
340342
Gammaproteobacteria
TTG
Gln
>WENV181201386
OERN01007010
145492
Gammaproteobacteria
CCG
Arg
>WENV181201240
OERN01000063
144784
Gammaproteobacteria
CAT
Met
>WENV181201346
OERN01002009
144784
Gammaproteobacteria
CAT
Met
>WENV181201366
OERN01003719
145489
Gammaproteobacteria
GAT
Ile
>WENV181201210
OERN01000014
144790
Gammaproteobacteria
CGG
Pro
>WENV181201241
OERN01000063
113614
Gammaproteobacteria
TAG
Leu
>WENV181201269
OERN01000175
6883
Gammaproteobacteria
GCT
Ser
>WENV181201283
OERN01000227
144788
Gammaproteobacteria
>WENV181201270
OERN01000175
144788
Gammaproteobacteria
>WENV181201373
OERN01004635
236025
Gammaproteobacteria
TTG
Gln
>WENV181201207
OERN01000006
49010
Gammaproteobacteria
GGA
Ser
>WENV181201284
OERN01000250
162284
Gammaproteobacteria
CCA
Trp
>WENV181201202
OERN01000003
144793
Gammaproteobacteria
GAC
Val
>WENV181201201
OERN01000003
144793
Gammaproteobacteria
GAC
Val
>WENV181201369
OERN01004270
148441
Gammaproteobacteria
TGG
Pro
>WENV181201208
OERN01000008
148441
Gammaproteobacteria
TGG
Pro
>WENV181201255
OERN01000105
237174
Gammaproteobacteria
CGT
Thr
>WENV181201367
OERN01003719
236029
Gammaproteobacteria
TGC
Ala
>WENV181201246
OERN01000074
235317
Gammaproteobacteria
GGT
Thr
>WENV181201200
OERN01000003
144792
Gammaproteobacteria
GAC
Val
>WENV181201354
OERN01003040
145491
Gammaproteobacteria
GGG
Pro
>WENV181201242
OERN01000064
83458
Gammaproteobacteria
CAG
Leu
>WENV181201199
OERN01000001
146661
Gammaproteobacteria
CAT
Met
>WENV181201203
OERN01000003
235313
Gammaproteobacteria
GTT
Asn
>WENV181201324
OERN01000755
152286
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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