This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1004488
SRR006906.48477
154774
Bacteroidota
GAT
Ile
>SRA1004973
SRR006906.204467
347983
Bacteroidota
TTC
Glu
>SRA1004899
SRR006906.176118
113741
Bacteroidota
GTA
Tyr
>SRA1004887
SRR006906.171654
360629
Bacteroidota
GGT
Thr
>SRA1004964
SRR006906.201036
360629
Bacteroidota
GGT
Thr
>SRA1004819
SRR006906.146503
59930
Bacteroidota
GCT
Ser
>SRA1004407
SRR006906.23050
150543
Bacteroidota
GAT
Ile
>SRA1004652
SRR006906.95132
150543
Bacteroidota
GAT
Ile
>SRA1004970
SRR006906.202495
150543
Bacteroidota
GAT
Ile
>SRA1004734
SRR006906.118160
37199
Bacteroidota
TAA
Leu
>SRA1004820
SRR006906.147593
37199
Bacteroidota
TAA
Leu
>SRA1004400
SRR006906.20484
241469
Bacteroidota
GAA
Phe
>SRA1004504
SRR006906.53550
241469
Bacteroidota
GAA
Phe
>SRA1004642
SRR006906.93029
241469
Bacteroidota
GAA
Phe
>SRA1005068
SRR006906.251114
241469
Bacteroidota
GAA
Phe
>SRA1004900
SRR006906.176118
340152
Bacteroidota
GGT
Thr
>SRA1004690
SRR006906.103022
239858
Bacteroidota
TTT
Lys
>SRA1004917
SRR006906.184152
239858
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK