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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1032620
SRR035088.65567
190649
Bacteroidota
GTT
Asn
>SRA1033367
SRR035088.236400
190649
Bacteroidota
GTT
Asn
>SRA1034100
SRR035088.486120
190649
Bacteroidota
GTT
Asn
>SRA1032890
SRR035088.123045
169357
Bacteroidota
CAT
Met
>SRA1033178
SRR035088.191138
169357
Bacteroidota
CAT
Met
>SRA1033396
SRR035088.244654
169357
Bacteroidota
CAT
Met
>SRA1033503
SRR035088.274888
169357
Bacteroidota
CAT
Met
>SRA1033547
SRR035088.286200
169357
Bacteroidota
CAT
Met
>SRA1033616
SRR035088.303236
169357
Bacteroidota
CAT
Met
>SRA1034016
SRR035088.447866
169357
Bacteroidota
CAT
Met
>SRA1034138
SRR035088.506173
169357
Bacteroidota
CAT
Met
>SRA1032507
SRR035088.30745
179315
Bacteroidota
TGC
Ala
>SRA1032986
SRR035088.144448
197066
Bacteroidota
GTT
Asn
>SRA1033171
SRR035088.189492
236699
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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