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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051802
SRR035098.78951
202993
Actinomycetota
CAT
Met
>SRA1051927
SRR035098.105267
202993
Actinomycetota
CAT
Met
>SRA1051581
SRR035098.34343
480761
Actinomycetota
GCA
Cys
>SRA1051726
SRR035098.64457
480761
Actinomycetota
GCA
Cys
>SRA1052058
SRR035098.132323
480761
Actinomycetota
GCA
Cys
>SRA1052719
SRR035098.260497
480761
Actinomycetota
GCA
Cys
>SRA1052991
SRR035098.315265
480761
Actinomycetota
GCA
Cys
>SRA1053079
SRR035098.332294
480761
Actinomycetota
GCA
Cys
>SRA1051806
SRR035098.80000
340854
Actinomycetota
TTC
Glu
>SRA1051900
SRR035098.99162
340854
Actinomycetota
TTC
Glu
>SRA1052440
SRR035098.204588
340854
Actinomycetota
TTC
Glu
>SRA1052478
SRR035098.211332
340854
Actinomycetota
TTC
Glu
>SRA1052848
SRR035098.284871
340854
Actinomycetota
TTC
Glu
>SRA1053069
SRR035098.330210
340854
Actinomycetota
TTC
Glu
>SRA1053250
SRR035098.368768
340854
Actinomycetota
TTC
Glu
>SRA1053550
SRR035098.434579
340854
Actinomycetota
TTC
Glu
>SRA1051818
SRR035098.82624
443526
Actinomycetota
CAC
Val
>SRA1051872
SRR035098.90867
443526
Actinomycetota
CAC
Val
>SRA1052538
SRR035098.223245
443526
Actinomycetota
CAC
Val
>SRA1052926
SRR035098.300857
443526
Actinomycetota
CAC
Val
>SRA1053072
SRR035098.330945
443526
Actinomycetota
CAC
Val
>SRA1053501
SRR035098.420540
443526
Actinomycetota
CAC
Val
>SRA1052986
SRR035098.313387
298505
Actinomycetota
CTC
Glu
>SRA1051940
SRR035098.109838
177601
Actinomycetota
CAT
Met
>SRA1052221
SRR035098.162392
177601
Actinomycetota
CAT
Met
>SRA1052412
SRR035098.197688
177601
Actinomycetota
CAT
Met
>SRA1052765
SRR035098.270353
177601
Actinomycetota
CAT
Met
>SRA1052769
SRR035098.272044
177601
Actinomycetota
CAT
Met
>SRA1053883
SRR035098.525216
177601
Actinomycetota
CAT
Met
>SRA1053894
SRR035098.527775
177601
Actinomycetota
CAT
Met
>SRA1052267
SRR035098.172800
58234
Actinomycetota
GGA
Ser
>SRA1053013
SRR035098.317956
58234
Actinomycetota
GGA
Ser
>SRA1053194
SRR035098.359300
58234
Actinomycetota
GGA
Ser
>SRA1053289
SRR035098.375421
58234
Actinomycetota
GGA
Ser
>SRA1053595
SRR035098.447902
405704
Actinomycetota
GCC
Gly
>SRA1053591
SRR035098.445953
223227
Actinomycetota
GAT
Ile
>SRA1053163
SRR035098.351172
191455
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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