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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1053520
SRR035098.425790
63417
Actinomycetota
GGA
Ser
>SRA1052267
SRR035098.172800
62694
Actinomycetota
GGA
Ser
>SRA1053013
SRR035098.317956
62694
Actinomycetota
GGA
Ser
>SRA1053194
SRR035098.359300
62694
Actinomycetota
GGA
Ser
>SRA1053289
SRR035098.375421
62694
Actinomycetota
GGA
Ser
>SRA1051880
SRR035098.92435
312259
Actinomycetota
CCG
Arg
>SRA1052644
SRR035098.243820
312259
Actinomycetota
CCG
Arg
>SRA1053297
SRR035098.377045
312259
Actinomycetota
CCG
Arg
>SRA1053314
SRR035098.381075
312259
Actinomycetota
CCG
Arg
>SRA1051806
SRR035098.80000
315284
Actinomycetota
TTC
Glu
>SRA1051900
SRR035098.99162
315284
Actinomycetota
TTC
Glu
>SRA1052440
SRR035098.204588
315284
Actinomycetota
TTC
Glu
>SRA1052478
SRR035098.211332
315284
Actinomycetota
TTC
Glu
>SRA1052848
SRR035098.284871
315284
Actinomycetota
TTC
Glu
>SRA1053069
SRR035098.330210
315284
Actinomycetota
TTC
Glu
>SRA1053250
SRR035098.368768
315284
Actinomycetota
TTC
Glu
>SRA1053550
SRR035098.434579
315284
Actinomycetota
TTC
Glu
>SRA1052277
SRR035098.174387
312171
Actinomycetota
CTT
Lys
>SRA1053634
SRR035098.457857
312171
Actinomycetota
CTT
Lys
>SRA1053638
SRR035098.458189
312171
Actinomycetota
CTT
Lys
>SRA1053654
SRR035098.460252
312171
Actinomycetota
CTT
Lys
>SRA1053758
SRR035098.489016
312171
Actinomycetota
CTT
Lys
>SRA1053591
SRR035098.445953
254944
Actinomycetota
GAT
Ile
>SRA1053061
SRR035098.327763
323375
Actinomycetota
TTT
Lys
>SRA1051587
SRR035098.35639
309379
Actinomycetota
TGC
Ala
>SRA1051629
SRR035098.42724
309379
Actinomycetota
TGC
Ala
>SRA1052160
SRR035098.152128
309379
Actinomycetota
TGC
Ala
>SRA1052561
SRR035098.229232
309379
Actinomycetota
TGC
Ala
>SRA1052581
SRR035098.232291
309379
Actinomycetota
TGC
Ala
>SRA1052859
SRR035098.286380
309379
Actinomycetota
TGC
Ala
>SRA1053422
SRR035098.402690
309379
Actinomycetota
TGC
Ala
>SRA1051913
SRR035098.101746
270998
Actinomycetota
TAC
Val
>SRA1052102
SRR035098.141339
270998
Actinomycetota
TAC
Val
>SRA1052124
SRR035098.145876
270998
Actinomycetota
TAC
Val
>SRA1052358
SRR035098.187114
270998
Actinomycetota
TAC
Val
>SRA1052364
SRR035098.189671
270998
Actinomycetota
TAC
Val
>SRA1052687
SRR035098.253750
270998
Actinomycetota
TAC
Val
>SRA1052837
SRR035098.283311
270998
Actinomycetota
TAC
Val
>SRA1053077
SRR035098.331838
270998
Actinomycetota
TAC
Val
>SRA1053332
SRR035098.383870
270998
Actinomycetota
TAC
Val
>SRA1053674
SRR035098.463909
270998
Actinomycetota
TAC
Val
>SRA1052518
SRR035098.219588
205466
Actinomycetota
>SRA1052794
SRR035098.277162
205466
Actinomycetota
>SRA1051985
SRR035098.119089
81194
Actinomycetota
GAG
Leu
>SRA1052066
SRR035098.133158
81194
Actinomycetota
GAG
Leu
>SRA1052220
SRR035098.162192
81194
Actinomycetota
GAG
Leu
>SRA1052334
SRR035098.183585
81194
Actinomycetota
GAG
Leu
>SRA1052868
SRR035098.288368
81194
Actinomycetota
GAG
Leu
>SRA1053508
SRR035098.422909
81194
Actinomycetota
GAG
Leu
>SRA1053364
SRR035098.391951
320612
Actinomycetota
CTT
Lys
>SRA1052776
SRR035098.273321
313102
Actinomycetota
GGC
Ala
>SRA1051668
SRR035098.55288
439915
Actinomycetota
TTG
Gln
>SRA1052192
SRR035098.158298
439915
Actinomycetota
TTG
Gln
>SRA1052665
SRR035098.248540
439915
Actinomycetota
TTG
Gln
>SRA1052743
SRR035098.265212
439915
Actinomycetota
TTG
Gln
>SRA1053063
SRR035098.328562
439915
Actinomycetota
TTG
Gln
>SRA1053443
SRR035098.406336
439915
Actinomycetota
TTG
Gln
>SRA1053630
SRR035098.457098
439915
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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