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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
137 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1053980
SRR035099.24068
282274
Chlorobiota
CGC
Ala
>SRA1054006
SRR035099.33218
282274
Chlorobiota
CGC
Ala
>SRA1054089
SRR035099.54354
282274
Chlorobiota
CGC
Ala
>SRA1054117
SRR035099.62528
282274
Chlorobiota
CGC
Ala
>SRA1054127
SRR035099.65846
282274
Chlorobiota
CGC
Ala
>SRA1054242
SRR035099.91526
282274
Chlorobiota
CGC
Ala
>SRA1054401
SRR035099.125308
282274
Chlorobiota
CGC
Ala
>SRA1054521
SRR035099.154279
282274
Chlorobiota
CGC
Ala
>SRA1054603
SRR035099.171088
282274
Chlorobiota
CGC
Ala
>SRA1054702
SRR035099.190412
282274
Chlorobiota
CGC
Ala
>SRA1053928
SRR035099.4232
281169
Chlorobiota
CAT
Met
>SRA1053929
SRR035099.4710
281169
Chlorobiota
CAT
Met
>SRA1053941
SRR035099.9991
281169
Chlorobiota
CAT
Met
>SRA1053943
SRR035099.10703
281169
Chlorobiota
CAT
Met
>SRA1054000
SRR035099.30629
281169
Chlorobiota
CAT
Met
>SRA1054040
SRR035099.40292
281169
Chlorobiota
CAT
Met
>SRA1054051
SRR035099.43638
281169
Chlorobiota
CAT
Met
>SRA1054092
SRR035099.54458
281169
Chlorobiota
CAT
Met
>SRA1054111
SRR035099.59467
281169
Chlorobiota
CAT
Met
>SRA1054297
SRR035099.100972
281169
Chlorobiota
CAT
Met
>SRA1054377
SRR035099.118635
281169
Chlorobiota
CAT
Met
>SRA1054872
SRR035099.242385
281169
Chlorobiota
CAT
Met
>SRA1053987
SRR035099.26555
282263
Chlorobiota
TTT
Lys
>SRA1054145
SRR035099.69803
282263
Chlorobiota
TTT
Lys
>SRA1054351
SRR035099.114707
282263
Chlorobiota
TTT
Lys
>SRA1054511
SRR035099.150241
282263
Chlorobiota
TTT
Lys
>SRA1054542
SRR035099.158870
282263
Chlorobiota
TTT
Lys
>SRA1054766
SRR035099.208392
282263
Chlorobiota
TTT
Lys
>SRA1054851
SRR035099.231543
282263
Chlorobiota
TTT
Lys
>SRA1054868
SRR035099.239222
282263
Chlorobiota
TTT
Lys
>SRA1054009
SRR035099.33878
282414
Chlorobiota
TGC
Ala
>SRA1054277
SRR035099.97766
282414
Chlorobiota
TGC
Ala
>SRA1054303
SRR035099.102524
282414
Chlorobiota
TGC
Ala
>SRA1054341
SRR035099.109643
282414
Chlorobiota
TGC
Ala
>SRA1054413
SRR035099.128778
282414
Chlorobiota
TGC
Ala
>SRA1054451
SRR035099.135142
282414
Chlorobiota
TGC
Ala
>SRA1054473
SRR035099.139719
282414
Chlorobiota
TGC
Ala
>SRA1054708
SRR035099.191305
282414
Chlorobiota
TGC
Ala
>SRA1054736
SRR035099.201881
282414
Chlorobiota
TGC
Ala
>SRA1053925
SRR035099.2440
176477
Chlorobiota
CAT
Met
>SRA1053926
SRR035099.3458
176477
Chlorobiota
CAT
Met
>SRA1053927
SRR035099.4109
176477
Chlorobiota
CAT
Met
>SRA1054664
SRR035099.183144
176477
Chlorobiota
CAT
Met
>SRA1054667
SRR035099.184486
176477
Chlorobiota
CAT
Met
>SRA1054687
SRR035099.189005
176477
Chlorobiota
CAT
Met
>SRA1054800
SRR035099.217586
176477
Chlorobiota
CAT
Met
>SRA1053936
SRR035099.8665
177501
Chlorobiota
GTG
His
>SRA1054148
SRR035099.69952
177501
Chlorobiota
GTG
His
>SRA1054152
SRR035099.70291
177501
Chlorobiota
GTG
His
>SRA1054669
SRR035099.184825
177501
Chlorobiota
GTG
His
>SRA1053923
SRR035099.1654
282094
Chlorobiota
GGT
Thr
>SRA1053957
SRR035099.16422
282094
Chlorobiota
GGT
Thr
>SRA1054176
SRR035099.76427
282094
Chlorobiota
GGT
Thr
>SRA1054359
SRR035099.115116
282094
Chlorobiota
GGT
Thr
>SRA1054376
SRR035099.118584
282094
Chlorobiota
GGT
Thr
>SRA1054529
SRR035099.156388
282094
Chlorobiota
GGT
Thr
>SRA1054531
SRR035099.156465
282094
Chlorobiota
GGT
Thr
>SRA1054548
SRR035099.159830
282094
Chlorobiota
GGT
Thr
>SRA1054564
SRR035099.164290
282094
Chlorobiota
GGT
Thr
>SRA1054592
SRR035099.169747
282094
Chlorobiota
GGT
Thr
>SRA1054610
SRR035099.172210
282094
Chlorobiota
GGT
Thr
>SRA1054650
SRR035099.181707
282094
Chlorobiota
GGT
Thr
>SRA1054652
SRR035099.181905
282094
Chlorobiota
GGT
Thr
>SRA1054659
SRR035099.182850
282094
Chlorobiota
GGT
Thr
>SRA1054685
SRR035099.188520
282094
Chlorobiota
GGT
Thr
>SRA1054700
SRR035099.190338
282094
Chlorobiota
GGT
Thr
>SRA1054747
SRR035099.205446
282094
Chlorobiota
GGT
Thr
>SRA1054760
SRR035099.207667
282094
Chlorobiota
GGT
Thr
>SRA1054845
SRR035099.228704
282094
Chlorobiota
GGT
Thr
>SRA1053931
SRR035099.5925
284284
Chlorobiota
GGC
Ala
>SRA1053986
SRR035099.26383
284284
Chlorobiota
GGC
Ala
>SRA1054107
SRR035099.58840
284284
Chlorobiota
GGC
Ala
>SRA1054264
SRR035099.95412
284284
Chlorobiota
GGC
Ala
>SRA1054567
SRR035099.164908
284284
Chlorobiota
GGC
Ala
>SRA1054597
SRR035099.170439
284284
Chlorobiota
GGC
Ala
>SRA1054628
SRR035099.177609
284284
Chlorobiota
GGC
Ala
>SRA1054639
SRR035099.180799
284284
Chlorobiota
GGC
Ala
>SRA1054671
SRR035099.185166
284284
Chlorobiota
GGC
Ala
>SRA1054713
SRR035099.193874
284284
Chlorobiota
GGC
Ala
>SRA1054784
SRR035099.212367
284284
Chlorobiota
GGC
Ala
>SRA1054840
SRR035099.228179
284284
Chlorobiota
GGC
Ala
>SRA1054231
SRR035099.89155
177726
Chlorobiota
CAT
Met
>SRA1054327
SRR035099.107773
177726
Chlorobiota
CAT
Met
>SRA1054388
SRR035099.120914
177726
Chlorobiota
CAT
Met
>SRA1054392
SRR035099.122921
177726
Chlorobiota
CAT
Met
>SRA1054552
SRR035099.160760
177726
Chlorobiota
CAT
Met
>SRA1054098
SRR035099.56248
118002
Chlorobiota
CAG
Leu
>SRA1054170
SRR035099.75098
118002
Chlorobiota
CAG
Leu
>SRA1054318
SRR035099.105520
118002
Chlorobiota
CAG
Leu
>SRA1054436
SRR035099.132884
118002
Chlorobiota
CAG
Leu
>SRA1054442
SRR035099.133879
118002
Chlorobiota
CAG
Leu
>SRA1054499
SRR035099.146768
118002
Chlorobiota
CAG
Leu
>SRA1054104
SRR035099.57663
282471
Chlorobiota
CGG
Pro
>SRA1054166
SRR035099.74421
282471
Chlorobiota
CGG
Pro
>SRA1054386
SRR035099.120700
282471
Chlorobiota
CGG
Pro
>SRA1054441
SRR035099.133547
282471
Chlorobiota
CGG
Pro
>SRA1054602
SRR035099.171058
282471
Chlorobiota
CGG
Pro
>SRA1054635
SRR035099.180282
282471
Chlorobiota
CGG
Pro
>SRA1054640
SRR035099.181264
282471
Chlorobiota
CGG
Pro
>SRA1054003
SRR035099.31181
177570
Chlorobiota
GGG
Pro
>SRA1054036
SRR035099.39261
177570
Chlorobiota
GGG
Pro
>SRA1054048
SRR035099.43552
177570
Chlorobiota
GGG
Pro
>SRA1054109
SRR035099.59181
177570
Chlorobiota
GGG
Pro
>SRA1054278
SRR035099.98600
177570
Chlorobiota
GGG
Pro
>SRA1054827
SRR035099.224168
177570
Chlorobiota
GGG
Pro
>SRA1054668
SRR035099.184825
179427
Chlorobiota
TCT
Arg
>SRA1054286
SRR035099.100189
155915
Chlorobiota
GTC
Asp
>SRA1054345
SRR035099.111395
155915
Chlorobiota
GTC
Asp
>SRA1054366
SRR035099.116255
155915
Chlorobiota
GTC
Asp
>SRA1054588
SRR035099.169159
155915
Chlorobiota
GTC
Asp
>SRA1054623
SRR035099.175780
155915
Chlorobiota
GTC
Asp
>SRA1054693
SRR035099.189538
155915
Chlorobiota
GTC
Asp
>SRA1053970
SRR035099.20027
282186
Chlorobiota
TGG
Pro
>SRA1054311
SRR035099.104370
282186
Chlorobiota
TGG
Pro
>SRA1054456
SRR035099.135712
282186
Chlorobiota
TGG
Pro
>SRA1054492
SRR035099.146170
282186
Chlorobiota
TGG
Pro
>SRA1054605
SRR035099.171252
282186
Chlorobiota
TGG
Pro
>SRA1054781
SRR035099.210938
282186
Chlorobiota
TGG
Pro
>SRA1054871
SRR035099.241314
282186
Chlorobiota
TGG
Pro
>SRA1054080
SRR035099.52354
177626
Chlorobiota
TAC
Val
>SRA1054116
SRR035099.61985
177626
Chlorobiota
TAC
Val
>SRA1054141
SRR035099.68754
177626
Chlorobiota
TAC
Val
>SRA1054187
SRR035099.80065
177626
Chlorobiota
TAC
Val
>SRA1054294
SRR035099.100826
177626
Chlorobiota
TAC
Val
>SRA1054336
SRR035099.108393
177626
Chlorobiota
TAC
Val
>SRA1054418
SRR035099.129377
177626
Chlorobiota
TAC
Val
>SRA1054474
SRR035099.139987
177626
Chlorobiota
TAC
Val
>SRA1054479
SRR035099.141335
177626
Chlorobiota
TAC
Val
>SRA1054503
SRR035099.148171
177626
Chlorobiota
TAC
Val
>SRA1054565
SRR035099.164502
177626
Chlorobiota
TAC
Val
>SRA1054620
SRR035099.175014
177626
Chlorobiota
TAC
Val
>SRA1054796
SRR035099.216630
177626
Chlorobiota
TAC
Val
>SRA1054870
SRR035099.240728
177626
Chlorobiota
TAC
Val
>SRA1054232
SRR035099.89155
282373
Chlorobiota
CCC
Gly
>SRA1054244
SRR035099.91592
282373
Chlorobiota
CCC
Gly
>SRA1054389
SRR035099.120914
282373
Chlorobiota
CCC
Gly
>SRA1054395
SRR035099.123341
282373
Chlorobiota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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