tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TAA

HIT: 18 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.29541 (5 seq.)
>WENV170602325 FUWD010226403 [FUWD] metagenome; unknown 285 198 - Leu TAA [ENA]
>WENV170621139 FUWD013050044 [FUWD] metagenome; unknown 1051 964 - Leu TAA [ENA]
>WENV170629308 FUWD013266734 [FUWD] metagenome; unknown 1051 964 - Leu TAA [ENA]
>SRA1017834 SRR035082.204241 454 Sequencing (SRP001803) 285 198 - Leu TAA [SRA]
>SRA1026160 SRR035085.155844 454 Sequencing (SRP001806) 342 429 + Leu TAA [SRA]
Identical group No.29546 (1 seq.)
>SRA1026656 SRR035085.251280 454 Sequencing (SRP001806) 117 206 + Leu TAA [SRA]
Identical group No.46723 (2 seq.)
>WENV170613250 FUWD012792016 [FUWD] metagenome; unknown 443 530 + Leu TAA [ENA]
>SRA1026230 SRR035085.167418 454 Sequencing (SRP001806) 113 26 - Leu TAA [SRA]
Identical group No.56222 (5 seq.)
>W131157556 AQSK01000189 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E13 [AQSK] 29848 29761 - Leu TAA [ENA]
>WENV170624830 FUWD013187433 [FUWD] metagenome; unknown 6783 6696 - Leu TAA [ENA]
>WENV170633098 FUWD013391324 [FUWD] metagenome; unknown 6783 6696 - Leu TAA [ENA]
>SRA1025989 SRR035085.121815 454 Sequencing (SRP001806) 357 270 - Leu TAA [SRA]
>SRA1026811 SRR035085.297438 454 Sequencing (SRP001806) 88 175 + Leu TAA [SRA]
Identical group No.56224 (8 seq.)
>WENV183800735 PVBE010612964 [PVBE] marine metagenome; water 186 273 + Leu TAA [ENA]
>WENV170017585 BARU01002011 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 530 617 + Leu TAA [ENA]
>WENV170605020 FUWD010441545 [FUWD] metagenome; unknown 29 116 + Leu TAA [ENA]
>WENV170698840 LGVF01427963 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 1656 1743 + Leu TAA [ENA]
>SRA1026103 SRR035085.143678 454 Sequencing (SRP001806) 67 154 + Leu TAA [SRA]
>SRA1036559 SRR035089.548123 454 Sequencing (SRP001810) 88 1 - Leu TAA [SRA]
>SRA1049087 SRR035095.17870 454 Sequencing (SRP001816) 168 255 + Leu TAA [SRA]
>SRA1049223 SRR035095.40504 454 Sequencing (SRP001816) 167 254 + Leu TAA [SRA]
Identical group No.56235 (4 seq.)
>WENV170622540 FUWD013108273 [FUWD] metagenome; unknown 1638 1551 - Leu TAA [ENA]
>WENV170630435 FUWD013308435 [FUWD] metagenome; unknown 4713 4800 + Leu TAA [ENA]
>SRA1026655 SRR035085.251222 454 Sequencing (SRP001806) 430 343 - Leu TAA [SRA]
>SRA1044111 SRR035092.225759 454 Sequencing (SRP001813) 247 334 + Leu TAA [SRA]
Identical group No.73179 (7 seq.)
>WENV170677988 LDZT01010304 [LDZT] terrestrial metagenome; oil reservoir sample SB1 4405 4319 - Leu TAA [ENA]
>WENV170678010 LDZT01010397 [LDZT] terrestrial metagenome; oil reservoir sample SB1 2852 2766 - Leu TAA [ENA]
>SRA1026027 SRR035085.129829 454 Sequencing (SRP001806) 254 340 + Leu TAA [SRA]
>W1610613973 LGGO01000072 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 4405 4319 - Leu TAA [ENA]
>W1610613995 LGGO01000165 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 2852 2766 - Leu TAA [ENA]
>W1710735056 LGGO01000072 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 4405 4319 - Leu TAA [ENA]
>W1710735078 LGGO01000165 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 2852 2766 - Leu TAA [ENA]
Identical group No.73180 (15 seq.)
>WENV180095374 MTBK01065349 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 746 663 - Leu TAA [ENA]
>WENV170677855 LDZT01009779 [LDZT] terrestrial metagenome; oil reservoir sample SB1 3942 3856 - Leu TAA [ENA]
>WENV170678016 LDZT01010446 [LDZT] terrestrial metagenome; oil reservoir sample SB1 12 98 + Leu TAA [ENA]
>WENV170678021 LDZT01010457 [LDZT] terrestrial metagenome; oil reservoir sample SB1 2205 2119 - Leu TAA [ENA]
>WENV170679212 LDZU01008945 [LDZU] terrestrial metagenome; oil reservoir sample SB2 7424 7338 - Leu TAA [ENA]
>WENV170679223 LDZU01008970 [LDZU] terrestrial metagenome; oil reservoir sample SB2 4968 5054 + Leu TAA [ENA]
>WENV170679228 LDZU01009021 [LDZU] terrestrial metagenome; oil reservoir sample SB2 2673 2759 + Leu TAA [ENA]
>WENV170718853 LSQX01092743 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3751 3834 + Leu TAA [ENA]
>WENV170727177 LSQX01407301 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3170 3087 - Leu TAA [ENA]
>WENV170978714 MTKZ01058889 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 406 323 - Leu TAA [ENA]
>SRA1026281 SRR035085.178721 454 Sequencing (SRP001806) 415 498 + Leu TAA [SRA]
>W1610614001 LGGO01000214 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 12 98 + Leu TAA [ENA]
>W1610614006 LGGO01000225 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 2205 2119 - Leu TAA [ENA]
>W1710735084 LGGO01000214 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 12 98 + Leu TAA [ENA]
>W1710735089 LGGO01000225 candidatedivisionWS6 candidate division WS6 bacterium 34_10 (LGGO) 2205 2119 - Leu TAA [ENA]
Identical group No.73242 (1 seq.)
>SRA1025513 SRR035085.29104 454 Sequencing (SRP001806) 49 133 + Leu TAA [SRA]
Identical group No.73257 (1 seq.)
>SRA1026069 SRR035085.135982 454 Sequencing (SRP001806) 91 177 + Leu TAA [SRA]
Identical group No.73262 (4 seq.)
>WENV170613139 FUWD012782154 [FUWD] metagenome; unknown 597 681 + Leu TAA [ENA]
>SRA1026196 SRR035085.161694 454 Sequencing (SRP001806) 246 162 - Leu TAA [SRA]
>SRA1042339 SRR035091.374555 454 Sequencing (SRP001812) 367 451 + Leu TAA [SRA]
>SRA1043763 SRR035092.171700 454 Sequencing (SRP001813) 131 215 + Leu TAA [SRA]
Identical group No.73267 (2 seq.)
>WENV170607856 FUWD010861693 [FUWD] metagenome; unknown 499 415 - Leu TAA [ENA]
>SRA1026313 SRR035085.184388 454 Sequencing (SRP001806) 508 424 - Leu TAA [SRA]
Identical group No.73268 (1 seq.)
>SRA1026483 SRR035085.214002 454 Sequencing (SRP001806) 366 449 + Leu TAA [SRA]
Identical group No.73274 (3 seq.)
>WENV170603316 FUWD010300920 [FUWD] metagenome; unknown 441 527 + Leu TAA [ENA]
>SRA1026638 SRR035085.246412 454 Sequencing (SRP001806) 347 433 + Leu TAA [SRA]
>SRA1047989 SRR035094.83255 454 Sequencing (SRP001815) 70 153 + Leu TAA [SRA]
Identical group No.73277 (1 seq.)
>SRA1026687 SRR035085.260505 454 Sequencing (SRP001806) 243 327 + Leu TAA [SRA]
Identical group No.100005 (3 seq.)
>WENV170623586 FUWD013159196 [FUWD] metagenome; unknown 1047 962 - Leu TAA [ENA]
>WENV170631863 FUWD013368698 [FUWD] metagenome; unknown 1047 962 - Leu TAA [ENA]
>SRA1026035 SRR035085.131076 454 Sequencing (SRP001806) 320 235 - Leu TAA [SRA]
Identical group No.100008 (1 seq.)
>SRA1026112 SRR035085.146319 454 Sequencing (SRP001806) 299 216 - Leu TAA [SRA]
Identical group No.100018 (2 seq.)
>W1711421414 MHYK01000346 Planctomycetes Planctomycetes bacterium RBG_16_55_9 (MHYK) 58195 58277 + Leu TAA [ENA]
>SRA1026818 SRR035085.299904 454 Sequencing (SRP001806) 176 92 - Leu TAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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