tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CCA

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281134 (70 seq.)
>A171007076 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 250971 250896 - Trp CCA - ¡û
>WENV180049451 MPLU02060297 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 103 179 + Trp CCA [ENA] ¢þ
>WENV180055440 MPLV02160079 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1259 1334 + Trp CCA [ENA] ¢þ
>WENV180590610 OCOT01098194 [OCOT] marine metagenome; ENVO:00002010 189 263 + Trp CCA [ENA] ¢þ
>WENV181092384 OEBK01000098 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 622 697 + Trp CCA [ENA] ¢þ
>WENV181306980 OFIO01006101 [OFIO] marine metagenome; seawater 647 572 - Trp CCA [ENA] ¢þ
>WENV181308813 OFIT01018927 [OFIT] marine metagenome; seawater 356 431 + Trp CCA [ENA] ¢þ
>WENV181309266 OFIV01000567 [OFIV] marine metagenome; seawater 1572 1497 - Trp CCA [ENA] ¢þ
>WENV181315666 OFJQ01001202 [OFJQ] marine metagenome; seawater 1085 1160 + Trp CCA [ENA] ¢þ
>WENV181315875 OFJR01000683 [OFJR] marine metagenome; seawater 147 222 + Trp CCA [ENA] ¢þ
>WENV181317100 OFJX01001029 [OFJX] marine metagenome; seawater 325 400 + Trp CCA [ENA] ¢þ
>WENV181318550 OFKA01000104 [OFKA] marine metagenome; seawater 3357 3432 + Trp CCA [ENA] ¢þ
>WENV181320148 OFKG01000541 [OFKG] marine metagenome; seawater 211 286 + Trp CCA [ENA] ¢þ
>WENV181320581 OFKI01000926 [OFKI] marine metagenome; seawater 2164 2238 + Trp CCA [ENA] ¢þ
>WENV181321722 OFKN01001978 [OFKN] marine metagenome; seawater 91 165 + Trp CCA [ENA] ¢þ
>WENV181323232 OFKX01000570 [OFKX] marine metagenome; seawater 797 723 - Trp CCA [ENA] ¢þ
>WENV181329382 OFLX01000259 [OFLX] seawater metagenome; seawater 2191 2117 - Trp CCA [ENA] ¢þ
>WENV181377772 OFRA01031025 [OFRA] wastewater metagenome; Lake Maggiore Verbania 274 199 - Trp CCA [ENA] ¢þ
>WENV181379615 OFRD01004093 [OFRD] wastewater metagenome; Exp Tend CN 100WW 1029 954 - Trp CCA [ENA] ¢þ
>WENV181386008 OFRL01000330 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 9883 9808 - Trp CCA [ENA] ¢þ
>WENV182560420 OJDU01000684 [OJDU] seawater metagenome; Sea water 1363 1289 - Trp CCA [ENA] ¢þ
>WENV183616275 OOED01000355 [OOED] marine metagenome; seawater 371 445 + Trp CCA [ENA] ¢þ
>WENV183618322 OOFN01025132 [OOFN] marine metagenome; seawater 194 120 - Trp CCA [ENA] ¢þ
>WENV183621871 OOFV01000250 [OOFV] marine metagenome; seawater 3947 3873 - Trp CCA [ENA] ¢þ
>WENV183626565 OOGJ01000034 [OOGJ] marine metagenome; seawater 151 225 + Trp CCA [ENA] ¢þ
>WENV170115083 CENF01399407 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1092 1168 + Trp CCA [ENA] ¢þ
>WENV170148349 CENZ01327605 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 94 19 - Trp CCA [ENA] ¢þ
>WENV170153815 CEOF01135647 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7273 7198 - Trp CCA [ENA] ¢þ
>WENV170272130 CERK01042998 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 306 231 - Trp CCA [ENA] ¢þ
>WENV170286568 CERW01110508 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 295 220 - Trp CCA [ENA] ¢þ
>WENV170294588 CESC01093203 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2751 2826 + Trp CCA [ENA] ¢þ
>WENV170298922 CESG01000427 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 522 597 + Trp CCA [ENA] ¢þ
>WENV170298940 CESG01002426 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 348 423 + Trp CCA [ENA] ¢þ
>WENV170321030 CESR01026066 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9262 9337 + Trp CCA [ENA] ¢þ
>WENV170324719 CESS01097926 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 306 381 + Trp CCA [ENA] ¢þ
>WENV170379220 CETV01104565 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 571 496 - Trp CCA [ENA] ¢þ
>WENV170475866 CEVI01043694 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1488 1563 + Trp CCA [ENA] ¢þ
>WENV170479094 CEVK01170043 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 682 607 - Trp CCA [ENA] ¢þ
>WENV170487985 CEVO01112411 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 96 171 + Trp CCA [ENA] ¢þ
>WENV170493276 CEVQ01350176 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 700 624 - Trp CCA [ENA] ¢þ
>WENV170508403 CEVX01161505 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 378 453 + Trp CCA [ENA] ¢þ
>WENV170533549 CEWO01139923 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 291 216 - Trp CCA [ENA] ¢þ
>WENV170566730 FLLY01000766 [FLLY] seawater metagenome; seawater 370 444 + Trp CCA [ENA] ¢þ
>WENV170568436 FLMP01039640 [FLMP] seawater metagenome; seawater 1029 955 - Trp CCA [ENA] ¢þ
>WENV170570491 FLOH01000006 [FLOH] marine metagenome; water 326653 326579 - Trp CCA [ENA] ¢þ
>WENV170599048 FUWD010060075 [FUWD] metagenome; unknown 183 257 + Trp CCA [ENA] ¢þ
>WENV170616461 FUWD012888705 [FUWD] metagenome; unknown 339 414 + Trp CCA [ENA] ¢þ
>WENV170616807 FUWD012903636 [FUWD] metagenome; unknown 976 1051 + Trp CCA [ENA] ¢þ
>WENV170616808 FUWD012903637 [FUWD] metagenome; unknown 284 360 + Trp CCA [ENA] ¢þ
>WENV170616810 FUWD012903736 [FUWD] metagenome; unknown 510 435 - Trp CCA [ENA] ¢þ
>WENV170617312 FUWD012921685 [FUWD] metagenome; unknown 1057 1132 + Trp CCA [ENA] ¢þ
>WENV170617313 FUWD012921686 [FUWD] metagenome; unknown 257 332 + Trp CCA [ENA] ¢þ
>WENV170619727 FUWD013020127 [FUWD] metagenome; unknown 1520 1594 + Trp CCA [ENA] ¢þ
>WENV170625281 FUWD013195146 [FUWD] metagenome; unknown 5077 5151 + Trp CCA [ENA] ¢þ
>WENV170627848 FUWD013238452 [FUWD] metagenome; unknown 1520 1594 + Trp CCA [ENA] ¢þ
>WENV170633521 FUWD013397967 [FUWD] metagenome; unknown 5077 5151 + Trp CCA [ENA] ¢þ
>WENV170763822 LWDU01021555 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1169 1094 - Trp CCA [ENA] ¢þ
>WENV170764654 LWDU01033089 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 6755 6830 + Trp CCA [ENA] ¢þ
>WENV170814007 MDSW01209946 [MDSW] marine metagenome; seawater 1936 1861 - Trp CCA [ENA] ¢þ
>WENV170944927 MDUO01013385 [MDUO] marine metagenome; 30 m water sample from station 6 670 594 - Trp CCA [ENA] ¢þ
>WENV170951281 MEHZ011545512 [MEHZ] marine metagenome; marine surface water 3 77 + Trp CCA [ENA] ¢þ
>WENV170953068 MEHZ011627336 [MEHZ] marine metagenome; marine surface water 212 286 + Trp CCA [ENA] ¢þ
>ENV09004266 ADKQ01000405 Marine metagenome apWin_C1 712 638 - Trp CCA [ENA] ¡û
>WENV11101325 AGBE01001445 Marine metagenome, Gulf of Maine surface waters 734 809 + Trp CCA [ENA] ¡û
>WENV11101356 AGBE01002010 Marine metagenome, Gulf of Maine surface waters 1761 1836 + Trp CCA [ENA] ¡û
>WENV11101389 AGBE01002141 Marine metagenome, Gulf of Maine surface waters 14393 14467 + Trp CCA [ENA] ¡û
>W1610597493 LFEW01000013 Nitrososphaerota Thaumarchaeota archaeon casp-thauma1 [LFEW] 48522 48597 + Trp CCA [ENA] ¡û
>WENV074402 AACY023973714 Marine microbial communities from Global Ocean Sampling (GOS) 749 827 + Trp CCA [ENA]
>WENV074468 AACY023976741 Marine microbial communities from Global Ocean Sampling (GOS) 272 350 + Trp CCA [ENA]
>W1610855515 LQMW01000017 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 182428 182502 + Trp CCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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