tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = GCA

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.381062 (2 seq.)
>SRA1002483 SRR001324.73535 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 107 31 - Cys GCA [SRA]
>SRA1002484 SRR001324.74437 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 107 31 - Cys GCA [SRA]
Identical group No.429107 (1 seq.)
>SRA1002335 SRR001322.15936 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 14 90 + Cys GCA [SRA]
Identical group No.429111 (1 seq.)
>SRA1002364 SRR001322.77033 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 1 74 + Cys GCA [SRA]
Identical group No.477965 (6 seq.)
>WENV170017958 BARV01001425 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 120 192 + Cys GCA [ENA]
>WENV170017961 BARV01001425 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 1324 1252 - Cys GCA [ENA]
>WENV170018165 BARV01020810 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 500 572 + Cys GCA [ENA]
>WENV170018174 BARV01021825 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 518 446 - Cys GCA [ENA]
>WENV170018255 BARV01031191 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 603 531 - Cys GCA [ENA]
>SRA1002373 SRR001322.110064 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 102 30 - Cys GCA [SRA]
Identical group No.480464 (4 seq.)
>WENV170647670 JREQ01001846 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 73 1 - Cys GCA [ENA]
>WENV170647727 JREQ01003238 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 8012 7937 - Cys GCA [ENA]
>WENV170647809 JREQ01005705 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 929 1004 + Cys GCA [ENA]
>SRA1002433 SRR001323.132222 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 95 20 - Cys GCA [SRA]
Identical group No.628135 (1 seq.)
>SRA1002365 SRR001322.80998 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 86 13 - Cys GCA [SRA]
Identical group No.639913 (1 seq.)
>SRA1002399 SRR001323.53235 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 34 106 + Cys GCA [SRA]
Identical group No.639915 (1 seq.)
>SRA1002430 SRR001323.119511 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 77 2 - Cys GCA [SRA]
Identical group No.639918 (1 seq.)
>SRA1002442 SRR001323.153954 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 30 105 + Cys GCA [SRA]
Identical group No.720434 (2 seq.)
>SRA1002448 SRR001324.8522 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 89 15 - Cys GCA [SRA]
>SRA1049899 SRR035095.156435 454 Sequencing (SRP001816) 491 417 - Cys GCA [SRA]
Identical group No.726864 (1 seq.)
>SRA1002478 SRR001324.64585 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 96 22 - Cys GCA [SRA]
Identical group No.771058 (1 seq.)
>SRA1002401 SRR001323.54290 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 18 92 + Cys GCA [SRA]
Identical group No.771059 (1 seq.)
>SRA1002408 SRR001323.63581 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 16 89 + Cys GCA [SRA]
Identical group No.812642 (1 seq.)
>SRA1002459 SRR001324.26909 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 40 110 + Cys GCA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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