tRNA genes clustered and arranged according to each identical group

Wastewater EBPR microbial communities from Bioreactor (USA sludge)

Anticodon = CCT

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272432 (14 seq.)
>W1710865794 LMGY01000016 Gammaproteobacteria Pseudoxanthomonas sp. Root630 [LMGY] 376965 377041 + Arg CCT [ENA] ¡û
>W131175924 ARJQ01000005 Gammaproteobacteria Rudaea cellulosilytica DSM 22992 [ARJQ] 809659 809735 + Arg CCT [ENA] ¡û
>W131226648 AUEN01000001 Gammaproteobacteria Lysobacter sp. URHA0019 [AUEN] 345223 345147 - Arg CCT [ENA] ¡û
>W141215615 AZUH01000016 Gammaproteobacteria Pseudoxanthomonas suwonensis J42 [AZUH] 28033 28109 + Arg CCT [ENA] ¡û
>W141216682 AZVB01000010 Gammaproteobacteria Pseudoxanthomonas sp. J35 [AZVB] 67789 67713 - Arg CCT [ENA] ¡û
>WENV170680643 LFEF01006777 [LFEF] freshwater metagenome; waterbloom 900 976 + Arg CCT [ENA] ¢þ
>C181200053 CP031413 Gammaproteobacteria Lysobacter sp. TY2-98 [CP031413] 1736680 1736756 + Arg CCT - ¡û
>W1810195894 PKSO01000002 Gammaproteobacteria Pseudoxanthomonas sp. KAs_5_3 [PKSO] 748782 748706 - Arg CCT [ENA] ¡û
>SRA1026542 SRR035085.224933 454 Sequencing (SRP001806) 458 382 - Arg CCT [SRA]
>W1510018845 BBUM02000163 Gammaproteobacteria Mizugakiibacter sediminis skMP5 [BBUM] 6146 6222 + Arg CCT [ENA] ¡û
>C11118138 CP002446 Gammaproteobacteria Pseudoxanthomonas suwonensis 11-1 [CP002446] 1366882 1366958 + Arg CCT [Ensembl] ¡û
>W1610728140 LMGY01000016 Gammaproteobacteria Pseudoxanthomonas sp. Root630 [LMGY] 376965 377041 + Arg CCT [ENA] ¡û
>WENV080065 AATO01002954 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 1429 1507 + Arg CCT [ENA]
>W1710579386 FPCI01000001 Gammaproteobacteria Pseudoxanthomonas sp. YR558 [FPCI] 721950 722026 + Arg CCT [ENA] ¡û
Identical group No.659006 (30 seq.)
>W1711385710 MEEN01000002 Bacteroidota Niastella sp. SCN 39-18 [MEEN] 49947 50021 + Arg CCT [ENA] ¡û
>W1711503784 MKTX01000014 Bacteroidota Sphingobacteriales bacterium 39-19 [MKTX] 57256 57330 + Arg CCT [ENA] ¡û
>WENV170555507 CXWL01000825 [CXWL] groundwater metagenome; biofilm material 158375 158449 + Arg CCT [ENA] ¢þ
>WENV170955762 MJUK01014012 [MJUK] soil metagenome; viral particles from soil sample TG5 152 76 - Arg CCT [ENA] ¢þ
>WENV170982283 MWVU01052812 [MWVU] soil metagenome; TG1-5 sample; Antarctic (ecotone) soil 549 473 - Arg CCT [ENA] ¢þ
>WENV170982328 MWVU01065728 [MWVU] soil metagenome; TG1-5 sample; Antarctic (ecotone) soil 154 80 - Arg CCT [ENA] ¢þ
>WENV170983666 MWVV01070190 [MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil 379 453 + Arg CCT [ENA] ¢þ
>WENV170984654 MWVV01384082 [MWVV] soil metagenome; PT-2 sample; Antarctic (ecotone) soil 313 387 + Arg CCT [ENA] ¢þ
>WENV170984830 MWVW01000432 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 4866 4942 + Arg CCT [ENA] ¢þ
>WENV170984911 MWVW01003309 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 567 493 - Arg CCT [ENA] ¢þ
>WENV170984981 MWVW01006974 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 1106 1178 + Arg CCT [ENA] ¢þ
>WENV170985339 MWVW01071135 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 210 136 - Arg CCT [ENA] ¢þ
>WENV170985474 MWVW01117899 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 52 126 + Arg CCT [ENA] ¢þ
>WENV170985525 MWVW01137267 [MWVW] soil metagenome; MtG22-5 sample; Antarctic (ecotone) soil 171 97 - Arg CCT [ENA] ¢þ
>WENV170985920 MWVX01006955 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 668 742 + Arg CCT [ENA] ¢þ
>WENV170986887 MWVX01092670 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 55 129 + Arg CCT [ENA] ¢þ
>WENV170986888 MWVX01092670 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 271 345 + Arg CCT [ENA] ¢þ
>WENV170987111 MWVX01125192 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 55 129 + Arg CCT [ENA] ¢þ
>WENV170987671 MWVX01242672 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 54 128 + Arg CCT [ENA] ¢þ
>WENV170987968 MWVX01323746 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 341 267 - Arg CCT [ENA] ¢þ
>WENV170988204 MWVX01407263 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 87 13 - Arg CCT [ENA] ¢þ
>WENV170988637 MWVX01564186 [MWVX] soil metagenome; MtG-4 sample; Antarctic (ecotone) soil 132 58 - Arg CCT [ENA] ¢þ
>WENV170995288 MWWF01000105 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 5299 5225 - Arg CCT [ENA] ¢þ
>WENV170995725 MWWF01043910 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 177 103 - Arg CCT [ENA] ¢þ
>WENV170995741 MWWF01047605 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 27 101 + Arg CCT [ENA] ¢þ
>WENV170997412 MWWG01120741 [MWWG] soil metagenome; MG6-4 sample; Antarctic (ecotone) soil 238 166 - Arg CCT [ENA] ¢þ
>WENV170998242 MWWJ01000136 [MWWJ] soil metagenome; CN-4 sample; Antarctic (ecotone) soil 7354 7430 + Arg CCT [ENA] ¢þ
>WENV170999216 MWWK01005575 [MWWK] soil metagenome; BG12-3 sample; Antarctic (ecotone) soil 834 908 + Arg CCT [ENA] ¢þ
>ENV09000804 ABSP01040850 Freshwater sediment metagenome lwMethane_C1 272 346 + Arg CCT [ENA] ¡û
>WENV080064 AATO01002925 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 824 748 - Arg CCT [ENA]
Identical group No.660237 (8 seq.)
>W1712082031 NHOS01000003 Bacteroidota Flavobacteriaceae bacterium JJC [NHOS] 224933 224859 - Arg CCT [ENA] ¡û
>W141291552 JASZ01000338 Bacteroidota Kaistella haifensis DSM 19056 [JASZ] 3452 3524 + Arg CCT [ENA] ¡û
>WENV170010192 APMI01010666 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 419 493 + Arg CCT [ENA] ¢þ
>C191116465 CP033933 Bacteroidota Kaistella haifensis G0079 [CP033933] 2179168 2179240 + Arg CCT - ¡û
>W1910933664 NIUY01000002 Bacteroidota Chryseobacterium sp. VAUSW3 [NIUY] 200544 200616 + Arg CCT [ENA] ¡û
>W1610095112 CYUH01000015 Bacteroidota Chryseobacterium senegalense FF12 [CYUH] 1093137 1093209 + Arg CCT [ENA] ¡û
>WENV080058 AATO01002602 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 165 91 - Arg CCT [ENA]
>W1710097907 CYUH01000015 Bacteroidota Chryseobacterium senegalense FF12 [CYUH] 1093137 1093209 + Arg CCT [ENA] ¡û
Identical group No.707309 (4 seq.)
>W141426782 JEMX01000019 Betaproteobacteria Candidatus Accumulibacter appositus sp. BA-92 [JEMX] 41448 41520 + Arg CCT [ENA] ¡û
>W141426820 JEMY01000013 Betaproteobacteria Candidatus Accumulibacter regalis sp. BA-93 [JEMY] 110416 110490 + Arg CCT [ENA] ¡û
>W1511592950 LBIU01000314 Betaproteobacteria Candidatus Accumulibacter adiacens phosphatis [LBIU] 4400 4328 - Arg CCT [ENA] ¡û
>WENV080060 AATO01002756 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 517 441 - Arg CCT [ENA]
Identical group No.712765 (8 seq.)
>WENV181188132 OEOE01030363 [OEOE] activated sludge metagenome; Activated Sludge 122 194 + Arg CCT [ENA] ¢þ
>C10101135 CP001715 Betaproteobacteria Candidatus Accumulibacter regalis [CP001715] 2812489 2812417 - Arg CCT [Ensembl] ¡û
>W1610506440 FLQX01000157 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 5853 5779 - Arg CCT [ENA] ¡û
>WENV079741 AATN01000116 Wastewater EBPR microbial communities from Bioreactor (Australian sludge) 2803 2729 - Arg CCT [ENA]
>WENV079851 AATN01003142 Wastewater EBPR microbial communities from Bioreactor (Australian sludge) 1048 1122 + Arg CCT [ENA]
>WENV079952 AATO01000005 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 85884 85958 + Arg CCT [ENA]
>WENV080159 AATO01010124 Wastewater EBPR microbial communities from Bioreactor (USA sludge) 643 717 + Arg CCT [ENA]
>W1710498943 FLQX01000157 Betaproteobacteria Candidatus Accumulibacter aalborgensis sp. S1 [FLQX] 5853 5779 - Arg CCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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