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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181789269
OGRO01011746
235146
Actinomycetota
CGT
Thr
>WENV181789295
OGRO01012539
119475
Actinomycetota
TAA
Leu
>WENV181789665
OGRO01031147
235347
Actinomycetota
GGC
Ala
>WENV181788910
OGRO01005194
235153
Actinomycetota
CCT
Arg
>WENV181789314
OGRO01013278
16400
Actinomycetota
GAG
Leu
>WENV181789559
OGRO01023596
37070
Actinomycetota
CGA
Ser
>WENV181789748
OGRO01038668
235092
Actinomycetota
CCG
Arg
>WENV181789780
OGRO01041241
245301
Actinomycetota
GCC
Gly
>WENV181789764
OGRO01040237
411601
Actinomycetota
CCC
Gly
>WENV181789697
OGRO01033375
147146
Actinomycetota
ACG
Arg
>WENV181789581
OGRO01025117
16219
Actinomycetota
GCT
Ser
>WENV181788940
OGRO01005429
235174
Actinomycetota
TGC
Ala
>WENV181789097
OGRO01007349
235174
Actinomycetota
TGC
Ala
>WENV181788644
OGRO01002368
235101
Actinomycetota
TTT
Lys
>WENV181789622
OGRO01028244
144625
Actinomycetota
GTC
Asp
>WENV181789455
OGRO01018685
153948
Actinomycetota
GGG
Pro
>WENV181789302
OGRO01012674
44855
Actinomycetota
TGA
Ser
>WENV181789351
OGRO01014570
44855
Actinomycetota
TGA
Ser
>WENV181788950
OGRO01005572
37212
Actinomycetota
GAG
Leu
>WENV181789419
OGRO01017175
145345
Actinomycetota
TAC
Val
>WENV181789060
OGRO01006645
44862
Actinomycetota
CGA
Ser
>WENV181789896
OGRO01053175
413665
Actinomycetota
TTG
Gln
>WENV181789588
OGRO01025751
144593
Actinomycetota
TAT
Ile
>WENV181789291
OGRO01012336
113703
Actinomycetota
TAG
Leu
>WENV181789417
OGRO01017103
144700
Actinomycetota
CAT
Met
>WENV181789521
OGRO01021183
238473
Actinomycetota
GTG
His
>WENV181789297
OGRO01012549
144636
Actinomycetota
GAT
Ile
>WENV181788815
OGRO01004055
243671
Actinomycetota
CTC
Glu
>WENV181789553
OGRO01023211
243671
Actinomycetota
CTC
Glu
>WENV181788943
OGRO01005461
45147
Actinomycetota
CGA
Ser
>WENV181788816
OGRO01004055
338148
Actinomycetota
CTG
Gln
>WENV181789554
OGRO01023211
338148
Actinomycetota
CTG
Gln
>WENV181789667
OGRO01031177
235148
Actinomycetota
GTT
Asn
>WENV181789668
OGRO01031177
235148
Actinomycetota
GTT
Asn
>WENV181789676
OGRO01031584
235148
Actinomycetota
GTT
Asn
>WENV181789677
OGRO01031584
235148
Actinomycetota
GTT
Asn
>WENV181789310
OGRO01013003
237792
Actinomycetota
CCT
Arg
>WENV181789639
OGRO01028709
113702
Actinomycetota
TAA
Leu
>WENV181789634
OGRO01028601
144825
Actinomycetota
CAT
Met
>WENV181789579
OGRO01024942
235348
Actinomycetota
CCT
Arg
>WENV181788696
OGRO01002894
237794
Actinomycetota
CCG
Arg
>WENV181788564
OGRO01001879
411554
Actinomycetota
CCC
Gly
>WENV181789701
OGRO01033875
113601
Actinomycetota
TAG
Leu
>WENV181789546
OGRO01022549
144595
Actinomycetota
CAA
Leu
>WENV181789544
OGRO01022283
145343
Actinomycetota
GGG
Pro
>WENV181789296
OGRO01012544
235149
Actinomycetota
CCT
Arg
>WENV181789058
OGRO01006605
240009
Actinomycetota
GGC
Ala
>WENV181789470
OGRO01019046
240009
Actinomycetota
GGC
Ala
>WENV181789461
OGRO01018753
414234
Actinomycetota
CTG
Gln
>WENV181789983
OGRO01070171
153915
Actinomycetota
ACG
Arg
>WENV181790098
OGRO01099348
235121
Actinomycetota
CGT
Thr
>WENV181789600
OGRO01026372
144635
Actinomycetota
TGG
Pro
>WENV181789650
OGRO01029457
80622
Actinomycetota
CAG
Leu
>WENV181789150
OGRO01008361
147734
Actinomycetota
GTC
Asp
>WENV181789755
OGRO01039113
147734
Actinomycetota
GTC
Asp
>WENV181790119
OGRO01103570
16222
Actinomycetota
GAG
Leu
>WENV181788823
OGRO01004192
412834
Actinomycetota
GCA
Cys
>WENV181789098
OGRO01007349
235173
Actinomycetota
GGC
Ala
>WENV181789259
OGRO01011600
235173
Actinomycetota
GGC
Ala
>WENV181789157
OGRO01008470
243162
Actinomycetota
GTT
Asn
>WENV181789974
OGRO01068512
144660
Actinomycetota
TAC
Val
>WENV181789002
OGRO01005963
95593
Actinomycetota
>WENV181789416
OGRO01017103
95593
Actinomycetota
>WENV181789831
OGRO01046649
95593
Actinomycetota
>WENV181789280
OGRO01012030
144823
Actinomycetota
TCT
Arg
>WENV181789580
OGRO01025076
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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