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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183508831
OMHF01007932
30089
Actinomycetota
GCT
Ser
>WENV183508692
OMHF01000232
480521
Actinomycetota
CCC
Gly
>WENV183508841
OMHF01008777
401852
Actinomycetota
TTG
Gln
>WENV183508802
OMHF01005303
184493
Actinomycetota
GGG
Pro
>WENV183508872
OMHF01011033
400702
Actinomycetota
CTG
Gln
>WENV183508699
OMHF01000316
480461
Actinomycetota
GCA
Cys
>WENV183508701
OMHF01000316
399101
Actinomycetota
CAC
Val
>WENV183508748
OMHF01002089
280986
Actinomycetota
GAA
Phe
>WENV183508688
OMHF01000027
176353
Actinomycetota
CAA
Leu
>WENV183508766
OMHF01002826
20643
Actinomycetota
GAG
Leu
>WENV183508714
OMHF01000500
287476
Actinomycetota
CTT
Lys
>WENV183508684
OMHF01000002
402794
Actinomycetota
TCC
Gly
>WENV183508780
OMHF01003857
179433
Actinomycetota
TAA
Leu
>WENV183508752
OMHF01002168
280976
Actinomycetota
CCG
Arg
>WENV183508709
OMHF01000426
280988
Actinomycetota
TAC
Val
>WENV183508697
OMHF01000283
312253
Actinomycetota
TGC
Ala
>WENV183508779
OMHF01003727
221845
Actinomycetota
GAT
Ile
>WENV183508818
OMHF01006966
481756
Actinomycetota
TCC
Gly
>WENV183508716
OMHF01000600
287452
Actinomycetota
CGT
Thr
>WENV183508735
OMHF01001357
280983
Actinomycetota
TGT
Thr
>WENV183508838
OMHF01008439
399188
Actinomycetota
CAT
Met
>WENV183508839
OMHF01008439
287437
Actinomycetota
CCA
Trp
>WENV183508732
OMHF01001250
131892
Actinomycetota
GTA
Tyr
>WENV183508734
OMHF01001250
180945
Actinomycetota
CAT
Met
>WENV183508737
OMHF01001454
20934
Actinomycetota
CGA
Ser
>WENV183508700
OMHF01000316
434601
Actinomycetota
GAC
Val
>WENV183508873
OMHF01011033
302285
Actinomycetota
CTC
Glu
>WENV183508687
OMHF01000021
47028
Actinomycetota
GGA
Ser
>WENV183508837
OMHF01008439
280979
Actinomycetota
GGT
Thr
>WENV183508696
OMHF01000283
176317
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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