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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734846
PJUA01000053
340609
Actinomycetota
GCC
Gly
>WENV183734790
PJUA01000012
235653
Actinomycetota
CTC
Glu
>WENV183734845
PJUA01000053
347986
Actinomycetota
CAC
Val
>WENV183735144
PJUA01001217
243300
Actinomycetota
CAC
Val
>WENV183734964
PJUA01000251
243493
Actinomycetota
CCT
Arg
>WENV183735381
PJUA01020020
243493
Actinomycetota
CCT
Arg
>WENV183735402
PJUA01023629
243493
Actinomycetota
CCT
Arg
>WENV183735330
PJUA01012481
80864
Actinomycetota
CAG
Leu
>WENV183734865
PJUA01000063
146956
Actinomycetota
CAT
Met
>WENV183735168
PJUA01001673
343516
Actinomycetota
CCT
Arg
>WENV183734827
PJUA01000038
158373
Actinomycetota
GGG
Pro
>WENV183734888
PJUA01000097
251199
Actinomycetota
TTT
Lys
>WENV183734947
PJUA01000215
148209
Actinomycetota
CGG
Pro
>WENV183735191
PJUA01002266
237508
Actinomycetota
TTT
Lys
>WENV183735126
PJUA01001171
45926
Actinomycetota
TGA
Ser
>WENV183735183
PJUA01002085
95968
Actinomycetota
TAG
Leu
>WENV183734870
PJUA01000068
412084
Actinomycetota
CCC
Gly
>WENV183735160
PJUA01001489
411983
Actinomycetota
TCC
Gly
>WENV183735352
PJUA01015864
95931
Actinomycetota
GTA
Tyr
>WENV183735229
PJUA01004122
16376
Actinomycetota
CGA
Ser
>WENV183734875
PJUA01000073
251197
Actinomycetota
TCT
Arg
>WENV183734948
PJUA01000215
45767
Actinomycetota
GGA
Ser
>WENV183735315
PJUA01011306
237513
Actinomycetota
ACG
Arg
>WENV183735245
PJUA01005480
237506
Actinomycetota
TAA
Leu
>WENV183735154
PJUA01001381
237593
Actinomycetota
GTT
Asn
>WENV183734863
PJUA01000063
97120
Actinomycetota
GTA
Tyr
>WENV183735150
PJUA01001252
342999
Actinomycetota
GGT
Thr
>WENV183734874
PJUA01000073
412879
Actinomycetota
TCC
Gly
>WENV183734789
PJUA01000012
338297
Actinomycetota
CTG
Gln
>WENV183734982
PJUA01000320
24368
Actinomycetota
CGA
Ser
>WENV183735151
PJUA01001252
146888
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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