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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081013
ABEF01021568
218644
Alphaproteobacteria
ACG
Arg
>WENV081438
ABEF01047482
296698
Alphaproteobacteria
CGC
Ala
>WENV081104
ABEF01028287
400387
Alphaproteobacteria
GGT
Thr
>WENV081341
ABEF01043315
201940
Alphaproteobacteria
CAT
Met
>WENV080959
ABEF01016967
400518
Alphaproteobacteria
GAA
Phe
>WENV081571
ABEF01051208
77412
Alphaproteobacteria
CAG
Leu
>WENV081572
ABEF01051208
77412
Alphaproteobacteria
CAG
Leu
>WENV081521
ABEF01049927
178731
Alphaproteobacteria
GTC
Asp
>WENV080890
ABEF01012192
178734
Alphaproteobacteria
TGG
Pro
>WENV080891
ABEF01012192
178733
Alphaproteobacteria
CAT
Met
>WENV081235
ABEF01037528
179941
Alphaproteobacteria
CAT
Met
>WENV081203
ABEF01034860
192131
Alphaproteobacteria
GTC
Asp
>WENV081542
ABEF01050829
176153
Alphaproteobacteria
CAT
Met
>WENV081242
ABEF01038021
178315
Alphaproteobacteria
CAT
Met
>WENV081102
ABEF01028230
118316
Alphaproteobacteria
CAA
Leu
>WENV081361
ABEF01044008
221998
Alphaproteobacteria
GAT
Ile
>WENV081633
ABEF01052835
221998
Alphaproteobacteria
GAT
Ile
>WENV081636
ABEF01052867
221998
Alphaproteobacteria
GAT
Ile
>WENV081350
ABEF01043726
400517
Alphaproteobacteria
GGT
Thr
>WENV080967
ABEF01017642
490723
Alphaproteobacteria
CTG
Gln
>WENV081480
ABEF01048749
178728
Alphaproteobacteria
CGG
Pro
>WENV081011
ABEF01021489
398994
Alphaproteobacteria
GTT
Asn
>WENV081217
ABEF01036435
398994
Alphaproteobacteria
GTT
Asn
>WENV081618
ABEF01052618
282981
Alphaproteobacteria
CCA
Trp
>WENV080913
ABEF01013921
228484
Alphaproteobacteria
CCG
Arg
>WENV081325
ABEF01042786
480946
Alphaproteobacteria
TTG
Gln
>WENV080960
ABEF01017095
229944
Alphaproteobacteria
CGG
Pro
>WENV081108
ABEF01028621
428327
Alphaproteobacteria
GCC
Gly
>WENV081247
ABEF01038240
118150
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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