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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734975
PJUA01000312
338523
Alphaproteobacteria
CGT
Thr
>WENV183735257
PJUA01005906
59382
Alphaproteobacteria
CAG
Leu
>WENV183735152
PJUA01001322
235844
Alphaproteobacteria
CGC
Ala
>WENV183735019
PJUA01000397
235847
Alphaproteobacteria
CAT
Met
>WENV183735043
PJUA01000542
152218
Alphaproteobacteria
TCT
Arg
>WENV183735065
PJUA01000650
411726
Alphaproteobacteria
GCA
Cys
>WENV183734933
PJUA01000175
59373
Alphaproteobacteria
CAG
Leu
>WENV183735089
PJUA01000837
59373
Alphaproteobacteria
CAG
Leu
>WENV183734985
PJUA01000322
339516
Alphaproteobacteria
CAC
Val
>WENV183735298
PJUA01009677
148279
Alphaproteobacteria
TCT
Arg
>WENV183735224
PJUA01003993
412459
Alphaproteobacteria
CTG
Gln
>WENV183735079
PJUA01000792
235839
Alphaproteobacteria
GTG
His
>WENV183735285
PJUA01007887
235504
Alphaproteobacteria
TGT
Thr
>WENV183734958
PJUA01000239
338496
Alphaproteobacteria
CAT
Met
>WENV183735294
PJUA01009193
345376
Alphaproteobacteria
GAC
Val
>WENV183734932
PJUA01000175
23427
Alphaproteobacteria
CGA
Ser
>WENV183735124
PJUA01001126
243304
Alphaproteobacteria
TTC
Glu
>WENV183734980
PJUA01000313
243304
Alphaproteobacteria
TTC
Glu
>WENV183734994
PJUA01000349
152219
Alphaproteobacteria
CCG
Arg
>WENV183735013
PJUA01000373
152220
Alphaproteobacteria
CCT
Arg
>WENV183735042
PJUA01000542
126683
Alphaproteobacteria
TGG
Pro
>WENV183735066
PJUA01000650
235841
Alphaproteobacteria
GTT
Asn
>WENV183734997
PJUA01000356
235841
Alphaproteobacteria
GTT
Asn
>WENV183735401
PJUA01023497
23392
Alphaproteobacteria
GGA
Ser
>WENV183735041
PJUA01000542
238730
Alphaproteobacteria
TTT
Lys
>WENV183735121
PJUA01001107
243303
Alphaproteobacteria
TGT
Thr
>WENV183735366
PJUA01016837
144972
Alphaproteobacteria
>WENV183734977
PJUA01000312
96322
Alphaproteobacteria
CAA
Leu
>WENV183734939
PJUA01000201
96322
Alphaproteobacteria
CAA
Leu
>WENV183734974
PJUA01000311
152444
Alphaproteobacteria
GGG
Pro
>WENV183735314
PJUA01011074
413302
Alphaproteobacteria
CCC
Gly
>WENV183735080
PJUA01000792
96930
Alphaproteobacteria
TAG
Leu
>WENV183735085
PJUA01000820
342846
Alphaproteobacteria
GAC
Val
>WENV183735355
PJUA01016271
159151
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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