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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070341
CDZQ01021918
179706
Bacillota
CAT
Met
>WENV170070535
CDZQ01028718
280428
Bacillota
GAA
Phe
>WENV170070539
CDZQ01028718
280428
Bacillota
GAA
Phe
>WENV170070077
CDZQ01013635
280483
Bacillota
GAA
Phe
>WENV170070175
CDZQ01016031
280483
Bacillota
GAA
Phe
>WENV170070644
CDZQ01031847
175825
Bacillota
GAT
Ile
>WENV170071116
CDZQ01046174
175825
Bacillota
GAT
Ile
>WENV170069795
CDZQ01003699
186051
Bacillota
GAT
Ile
>WENV170069937
CDZQ01007453
186051
Bacillota
GAT
Ile
>WENV170070646
CDZQ01031850
186051
Bacillota
GAT
Ile
>WENV170071152
CDZQ01047902
186051
Bacillota
GAT
Ile
>WENV170069992
CDZQ01009577
201856
Bacillota
GAT
Ile
>WENV170070942
CDZQ01041116
201856
Bacillota
GAT
Ile
>WENV170070849
CDZQ01037566
489283
Bacillota
GCA
Cys
>WENV170071045
CDZQ01044619
489283
Bacillota
GCA
Cys
>WENV170071205
CDZQ01048923
489283
Bacillota
GCA
Cys
>WENV170070783
CDZQ01036032
287289
Bacillota
GCC
Gly
>WENV170071329
CDZQ01053476
287289
Bacillota
GCC
Gly
>WENV170070532
CDZQ01028718
290325
Bacillota
GCC
Gly
>WENV170070536
CDZQ01028718
290325
Bacillota
GCC
Gly
>WENV170070540
CDZQ01028718
290325
Bacillota
GCC
Gly
>WENV170070078
CDZQ01013635
285756
Bacillota
GCC
Gly
>WENV170070176
CDZQ01016031
285756
Bacillota
GCC
Gly
>WENV170071507
CDZQ01058415
285756
Bacillota
GCC
Gly
>WENV170071536
CDZQ01060071
195149
Bacillota
GTC
Asp
>WENV170070439
CDZQ01026497
175911
Bacillota
GTC
Asp
>WENV170070781
CDZQ01036032
175911
Bacillota
GTC
Asp
>WENV170071086
CDZQ01045297
175911
Bacillota
GTC
Asp
>WENV170071128
CDZQ01046691
175911
Bacillota
GTC
Asp
>WENV170071201
CDZQ01048867
175911
Bacillota
GTC
Asp
>WENV170071484
CDZQ01057900
175911
Bacillota
GTC
Asp
>WENV170070436
CDZQ01026497
298260
Bacillota
GTT
Asn
>WENV170070533
CDZQ01028718
280466
Bacillota
TAC
Val
>WENV170070537
CDZQ01028718
280466
Bacillota
TAC
Val
>WENV170070328
CDZQ01021918
313596
Bacillota
TAC
Val
>WENV170070079
CDZQ01013635
312380
Bacillota
TAC
Val
>WENV170070805
CDZQ01036392
312380
Bacillota
TAC
Val
>WENV170071506
CDZQ01058415
312380
Bacillota
TAC
Val
>WENV170071535
CDZQ01060071
312380
Bacillota
TAC
Val
>WENV170070337
CDZQ01021918
46655
Bacillota
TGA
Ser
>WENV170070510
CDZQ01027921
295166
Bacillota
TGC
Ala
>WENV170069794
CDZQ01003699
295350
Bacillota
TGC
Ala
>WENV170070006
CDZQ01010435
303718
Bacillota
TGT
Thr
>WENV170070054
CDZQ01012751
303718
Bacillota
TGT
Thr
>WENV170070108
CDZQ01014258
303718
Bacillota
TGT
Thr
>WENV170070198
CDZQ01016993
303718
Bacillota
TGT
Thr
>WENV170070550
CDZQ01028965
303718
Bacillota
TGT
Thr
>WENV170070867
CDZQ01038374
303718
Bacillota
TGT
Thr
>WENV170069854
CDZQ01004698
406553
Bacillota
TTG
Gln
>WENV170069884
CDZQ01005695
406553
Bacillota
TTG
Gln
>WENV170070145
CDZQ01015548
406553
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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