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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077357
CDZU01029446
231532
Bacillota
ACG
Arg
>WENV170077438
CDZU01032393
231532
Bacillota
ACG
Arg
>WENV170076948
CDZU01017813
175842
Bacillota
CAC
Val
>WENV170077227
CDZU01025122
215243
Bacillota
CAT
Met
>WENV170077263
CDZU01026773
215243
Bacillota
CAT
Met
>WENV170077009
CDZU01018947
183993
Bacillota
CAT
Met
>WENV170077716
CDZU01039211
291629
Bacillota
CCA
Trp
>WENV170077437
CDZU01032393
289474
Bacillota
CCA
Trp
>WENV170076382
CDZU01001799
497729
Bacillota
CCA
Trp
>WENV170077278
CDZU01027213
179755
Bacillota
CCG
Arg
>WENV170076505
CDZU01005410
404085
Bacillota
CCG
Arg
>WENV170077568
CDZU01034970
184522
Bacillota
CCT
Arg
>WENV170077010
CDZU01018948
47166
Bacillota
CGA
Ser
>WENV170077030
CDZU01019335
291581
Bacillota
CGG
Pro
>WENV170077328
CDZU01028747
241041
Bacillota
CGG
Pro
>WENV170077330
CDZU01028747
241041
Bacillota
CGG
Pro
>WENV170077545
CDZU01034183
289476
Bacillota
CGT
Thr
>WENV170077712
CDZU01038964
398854
Bacillota
CTC
Glu
>WENV170076594
CDZU01008035
480322
Bacillota
CTG
Gln
>WENV170076913
CDZU01016876
480322
Bacillota
CTG
Gln
>WENV170077029
CDZU01019335
480322
Bacillota
CTG
Gln
>WENV170077360
CDZU01029474
403952
Bacillota
CTG
Gln
>WENV170077564
CDZU01034970
403952
Bacillota
CTG
Gln
>WENV170076906
CDZU01016594
289154
Bacillota
CTT
Lys
>WENV170076766
CDZU01012459
280428
Bacillota
GAA
Phe
>WENV170076583
CDZU01007743
291634
Bacillota
GAA
Phe
>WENV170077338
CDZU01028996
291634
Bacillota
GAA
Phe
>WENV170077850
CDZU01044829
184523
Bacillota
GAC
Val
>WENV170077198
CDZU01024136
100999
Bacillota
GAG
Leu
>WENV170077201
CDZU01024136
100999
Bacillota
GAG
Leu
>WENV170076584
CDZU01007743
234991
Bacillota
GAT
Ile
>WENV170076812
CDZU01013855
236579
Bacillota
GAT
Ile
>WENV170076348
CDZU01001011
186051
Bacillota
GAT
Ile
>WENV170077279
CDZU01027235
201856
Bacillota
GAT
Ile
>WENV170076652
CDZU01009633
489283
Bacillota
GCA
Cys
>WENV170076651
CDZU01009633
424998
Bacillota
GCC
Gly
>WENV170077547
CDZU01034256
424998
Bacillota
GCC
Gly
>WENV170077042
CDZU01019621
290325
Bacillota
GCC
Gly
>WENV170076774
CDZU01012686
405393
Bacillota
GCC
Gly
>WENV170077339
CDZU01028996
405393
Bacillota
GCC
Gly
>WENV170077715
CDZU01039211
405393
Bacillota
GCC
Gly
>WENV170076328
CDZU01000370
20913
Bacillota
GCT
Ser
>WENV170077331
CDZU01028747
15649
Bacillota
GGA
Ser
>WENV170077047
CDZU01019676
312274
Bacillota
GGC
Ala
>WENV170076799
CDZU01013530
183995
Bacillota
GGG
Pro
>WENV170077008
CDZU01018947
289149
Bacillota
GGT
Thr
>WENV170077425
CDZU01031993
289123
Bacillota
GGT
Thr
>WENV170077006
CDZU01018947
101000
Bacillota
GTA
Tyr
>WENV170076582
CDZU01007743
186123
Bacillota
GTC
Asp
>WENV170077337
CDZU01028996
186123
Bacillota
GTC
Asp
>WENV170077714
CDZU01039211
186123
Bacillota
GTC
Asp
>WENV170077202
CDZU01024136
184455
Bacillota
GTC
Asp
>WENV170076649
CDZU01009633
184455
Bacillota
GTC
Asp
>WENV170077196
CDZU01024136
184455
Bacillota
GTC
Asp
>WENV170077199
CDZU01024136
184455
Bacillota
GTC
Asp
>WENV170076882
CDZU01015948
175911
Bacillota
GTC
Asp
>WENV170076329
CDZU01000370
289475
Bacillota
GTG
His
>WENV170077359
CDZU01029474
289147
Bacillota
GTT
Asn
>WENV170077439
CDZU01032393
289147
Bacillota
GTT
Asn
>WENV170077563
CDZU01034970
289147
Bacillota
GTT
Asn
>WENV170077798
CDZU01042008
175868
Bacillota
GTT
Asn
>WENV170076653
CDZU01009633
48832
Bacillota
TAA
Leu
>WENV170077363
CDZU01029474
359682
Bacillota
TAC
Val
>WENV170077567
CDZU01034970
359682
Bacillota
TAC
Val
>WENV170076764
CDZU01012459
280427
Bacillota
TAC
Val
>WENV170076772
CDZU01012685
510477
Bacillota
TCC
Gly
>WENV170076504
CDZU01005410
183994
Bacillota
TCT
Arg
>WENV170076334
CDZU01000391
47207
Bacillota
TGA
Ser
>WENV170077274
CDZU01027078
56074
Bacillota
TGA
Ser
>WENV170076811
CDZU01013855
295166
Bacillota
TGC
Ala
>WENV170076545
CDZU01006649
295350
Bacillota
TGC
Ala
>WENV170076585
CDZU01007743
291650
Bacillota
TGC
Ala
>WENV170076502
CDZU01005410
200900
Bacillota
TGG
Pro
>WENV170077422
CDZU01031993
332181
Bacillota
TGT
Thr
>WENV170077556
CDZU01034579
303718
Bacillota
TGT
Thr
>WENV170077600
CDZU01036035
303718
Bacillota
TGT
Thr
>WENV170077362
CDZU01029474
289472
Bacillota
TTC
Glu
>WENV170077440
CDZU01032393
289472
Bacillota
TTC
Glu
>WENV170077566
CDZU01034970
289472
Bacillota
TTC
Glu
>WENV170077721
CDZU01039322
398832
Bacillota
TTC
Glu
>WENV170077724
CDZU01039519
398832
Bacillota
TTC
Glu
>WENV170077373
CDZU01029917
480324
Bacillota
TTG
Gln
>WENV170077617
CDZU01036313
480324
Bacillota
TTG
Gln
>WENV170076330
CDZU01000370
403766
Bacillota
TTG
Gln
>WENV170076586
CDZU01007743
346451
Bacillota
TTT
Lys
>WENV170077070
CDZU01020685
346451
Bacillota
TTT
Lys
>WENV170077361
CDZU01029474
289745
Bacillota
TTT
Lys
>WENV170077565
CDZU01034970
289745
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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