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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180996326
ODVS01000002
281701
Bacillota
TGC
Ala
>WENV180996589
ODVS01000228
287000
Bacillota
GTT
Asn
>WENV180996591
ODVS01000231
245296
Bacillota
CCC
Gly
>WENV180996594
ODVS01000233
263765
Bacillota
TAC
Val
>WENV180996595
ODVS01000233
240017
Bacillota
GCC
Gly
>WENV180996608
ODVS01000283
11034
Bacillota
GGA
Ser
>WENV180996619
ODVS01000322
263765
Bacillota
TAC
Val
>WENV180996622
ODVS01000322
271471
Bacillota
GCC
Gly
>WENV180996648
ODVS01000349
144621
Bacillota
GTT
Asn
>WENV180996674
ODVS01000409
196621
Bacillota
GTC
Asp
>WENV180996675
ODVS01000409
235095
Bacillota
GGT
Thr
>WENV180996682
ODVS01000430
235079
Bacillota
GAA
Phe
>WENV180996683
ODVS01000430
304022
Bacillota
GCC
Gly
>WENV180996744
ODVS01000615
304022
Bacillota
GCC
Gly
>WENV180996745
ODVS01000615
235117
Bacillota
TAC
Val
>WENV180996746
ODVS01000615
196621
Bacillota
GTC
Asp
>WENV180996747
ODVS01000615
235079
Bacillota
GAA
Phe
>WENV180996748
ODVS01000615
304022
Bacillota
GCC
Gly
>WENV180996758
ODVS01000695
263765
Bacillota
TAC
Val
>WENV180996760
ODVS01000695
271471
Bacillota
GCC
Gly
>WENV180996765
ODVS01000706
272992
Bacillota
CTT
Lys
>WENV180996851
ODVS01001193
148188
Bacillota
CCG
Arg
>WENV180996853
ODVS01001224
304022
Bacillota
GCC
Gly
>WENV180996854
ODVS01001224
235117
Bacillota
TAC
Val
>WENV180996856
ODVS01001224
235079
Bacillota
GAA
Phe
>WENV180996862
ODVS01001267
240017
Bacillota
GCC
Gly
>WENV180996866
ODVS01001352
274189
Bacillota
TGT
Thr
>WENV180996878
ODVS01001385
152149
Bacillota
GTG
His
>WENV180996888
ODVS01001469
238974
Bacillota
GAA
Phe
>WENV180996904
ODVS01001542
338129
Bacillota
TGT
Thr
>WENV180996907
ODVS01001559
154063
Bacillota
CGG
Pro
>WENV180996918
ODVS01001611
274189
Bacillota
TGT
Thr
>WENV180996920
ODVS01001616
144612
Bacillota
TCT
Arg
>WENV180996945
ODVS01001848
235098
Bacillota
GAC
Val
>WENV180996953
ODVS01001907
235098
Bacillota
GAC
Val
>WENV180996974
ODVS01002231
114075
Bacillota
TAG
Leu
>WENV180996985
ODVS01002339
144612
Bacillota
TCT
Arg
>WENV180997000
ODVS01002590
44854
Bacillota
TGA
Ser
>WENV180997001
ODVS01002590
4624
Bacillota
GCT
Ser
>WENV180997013
ODVS01002648
338128
Bacillota
TTC
Glu
>WENV180997014
ODVS01002649
309417
Bacillota
GGC
Ala
>WENV180997031
ODVS01002961
414486
Bacillota
CCC
Gly
>WENV180997051
ODVS01003245
304022
Bacillota
GCC
Gly
>WENV180997052
ODVS01003245
235117
Bacillota
TAC
Val
>WENV180997054
ODVS01003245
235079
Bacillota
GAA
Phe
>WENV180997076
ODVS01003593
144594
Bacillota
CAC
Val
>WENV180997083
ODVS01003721
100326
Bacillota
GTA
Tyr
>WENV180997109
ODVS01004262
411547
Bacillota
CTG
Gln
>WENV180997110
ODVS01004262
245298
Bacillota
CGG
Pro
>WENV180997116
ODVS01004576
100326
Bacillota
GTA
Tyr
>WENV180997118
ODVS01004576
238974
Bacillota
GAA
Phe
>WENV180997150
ODVS01005276
144583
Bacillota
ACG
Arg
>WENV180997156
ODVS01005393
293599
Bacillota
CTT
Lys
>WENV180997161
ODVS01005546
238910
Bacillota
CTT
Lys
>WENV180997164
ODVS01005546
245386
Bacillota
CCA
Trp
>WENV180997166
ODVS01005693
235095
Bacillota
GGT
Thr
>WENV180997184
ODVS01006160
169968
Bacillota
CAT
Met
>WENV180997208
ODVS01006665
338149
Bacillota
CTC
Glu
>WENV180997209
ODVS01006665
144621
Bacillota
GTT
Asn
>WENV180997212
ODVS01006705
80612
Bacillota
GTA
Tyr
>WENV180997215
ODVS01006871
59312
Bacillota
CAG
Leu
>WENV180997217
ODVS01006881
152492
Bacillota
GGG
Pro
>WENV180997235
ODVS01007839
247734
Bacillota
TGC
Ala
>WENV180997268
ODVS01009036
338147
Bacillota
CTC
Glu
>WENV180997274
ODVS01009157
148188
Bacillota
CCG
Arg
>WENV180997281
ODVS01009718
429429
Bacillota
CCA
Trp
>WENV180997283
ODVS01009892
173314
Bacillota
GAT
Ile
>WENV180997312
ODVS01010930
162445
Bacillota
CAT
Met
>WENV180997313
ODVS01010993
429429
Bacillota
CCA
Trp
>WENV180997350
ODVS01013583
41154
Bacillota
TAA
Leu
>WENV180997361
ODVS01013950
345329
Bacillota
TTC
Glu
>WENV180997365
ODVS01014625
148239
Bacillota
TCT
Arg
>WENV180997366
ODVS01014698
58712
Bacillota
CAG
Leu
>WENV180997408
ODVS01018120
272992
Bacillota
CTT
Lys
>WENV180997409
ODVS01018252
148188
Bacillota
CCG
Arg
>WENV180997411
ODVS01018424
148239
Bacillota
TCT
Arg
>WENV180997412
ODVS01018424
144610
Bacillota
GTG
His
>WENV180997448
ODVS01021968
163943
Bacillota
GTC
Asp
>WENV180997456
ODVS01022589
235098
Bacillota
GAC
Val
>WENV180997462
ODVS01023302
144599
Bacillota
GTC
Asp
>WENV180997474
ODVS01023862
235137
Bacillota
TGC
Ala
>WENV180997492
ODVS01026723
429429
Bacillota
CCA
Trp
>WENV180997510
ODVS01029657
163943
Bacillota
GTC
Asp
>WENV180997533
ODVS01033043
144583
Bacillota
ACG
Arg
>WENV180997540
ODVS01034682
307003
Bacillota
TGC
Ala
>WENV180997573
ODVS01040608
235127
Bacillota
TTT
Lys
>WENV180997574
ODVS01040668
196621
Bacillota
GTC
Asp
>WENV180997575
ODVS01040668
235095
Bacillota
GGT
Thr
>WENV180997581
ODVS01042153
235877
Bacillota
TGC
Ala
>WENV180997609
ODVS01046122
155089
Bacillota
CAT
Met
>WENV180997617
ODVS01047738
338149
Bacillota
CTC
Glu
>WENV180997618
ODVS01047738
272992
Bacillota
CTT
Lys
>WENV180997622
ODVS01049512
44859
Bacillota
AAG
Leu
>WENV180997629
ODVS01050124
144652
Bacillota
GTC
Asp
>WENV180997630
ODVS01050480
235150
Bacillota
TGC
Ala
>WENV180997635
ODVS01052273
411549
Bacillota
TTG
Gln
>WENV180997640
ODVS01054004
292012
Bacillota
TGC
Ala
>WENV180997649
ODVS01057676
196621
Bacillota
GTC
Asp
>WENV180997650
ODVS01057676
235095
Bacillota
GGT
Thr
>WENV180997672
ODVS01062428
147684
Bacillota
ACG
Arg
>WENV180997675
ODVS01063464
37269
Bacillota
TGA
Ser
>WENV180997680
ODVS01064499
235127
Bacillota
TTT
Lys
>WENV180997685
ODVS01066753
235124
Bacillota
TGG
Pro
>WENV180997698
ODVS01069277
250201
Bacillota
TGC
Ala
>WENV180997719
ODVS01077274
58712
Bacillota
CAG
Leu
>WENV180997724
ODVS01081320
235171
Bacillota
CCA
Trp
>WENV180997727
ODVS01081802
11034
Bacillota
GGA
Ser
>WENV180997753
ODVS01093558
58712
Bacillota
CAG
Leu
>WENV180997754
ODVS01093602
156189
Bacillota
GAT
Ile
>WENV180997771
ODVS01103508
153911
Bacillota
GAT
Ile
>WENV180997773
ODVS01104386
287000
Bacillota
GTT
Asn
>WENV180997780
ODVS01107150
144610
Bacillota
GTG
His
>WENV180997782
ODVS01107703
412387
Bacillota
GCA
Cys
>WENV180997793
ODVS01120082
156937
Bacillota
GTG
His
>WENV180997803
ODVS01124663
243098
Bacillota
GGT
Thr
>WENV180997804
ODVS01125047
304022
Bacillota
GCC
Gly
>WENV180997825
ODVS01136333
11034
Bacillota
GGA
Ser
>WENV180997834
ODVS01139581
413152
Bacillota
TCC
Gly
>WENV180997839
ODVS01142708
201704
Bacillota
GAT
Ile
>WENV180997882
ODVS01169665
263765
Bacillota
TAC
Val
>WENV180997893
ODVS01174716
301896
Bacillota
TAC
Val
>WENV180997904
ODVS01182445
198770
Bacillota
GTC
Asp
>WENV180997905
ODVS01183516
144668
Bacillota
GTC
Asp
>WENV180997912
ODVS01188855
287000
Bacillota
GTT
Asn
>WENV180997939
ODVS01208617
235142
Bacillota
CTT
Lys
>WENV180997954
ODVS01217182
238910
Bacillota
CTT
Lys
>WENV180997958
ODVS01217306
144652
Bacillota
GTC
Asp
>WENV180997963
ODVS01217789
271471
Bacillota
GCC
Gly
>WENV180997968
ODVS01217889
144668
Bacillota
GTC
Asp
>WENV180997969
ODVS01218007
144610
Bacillota
GTG
His
>WENV180997972
ODVS01218089
263765
Bacillota
TAC
Val
>WENV180997989
ODVS01220022
235098
Bacillota
GAC
Val
>WENV180997990
ODVS01220039
313454
Bacillota
GAA
Phe
>WENV180997993
ODVS01220063
411547
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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