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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181790457
OGRP01000392
99852
Bacillota
GTA
Tyr
>WENV181790551
OGRP01000603
99852
Bacillota
GTA
Tyr
>WENV181790445
OGRP01000354
343590
Bacillota
GCC
Gly
>WENV181790446
OGRP01000354
343590
Bacillota
GCC
Gly
>WENV181790509
OGRP01000509
343590
Bacillota
GCC
Gly
>WENV181791129
OGRP01009628
280500
Bacillota
TGC
Ala
>WENV181790504
OGRP01000497
349107
Bacillota
GCC
Gly
>WENV181790508
OGRP01000497
349107
Bacillota
GCC
Gly
>WENV181791252
OGRP01033413
480520
Bacillota
TCC
Gly
>WENV181791139
OGRP01010754
405363
Bacillota
GCA
Cys
>WENV181790379
OGRP01000229
290391
Bacillota
TAC
Val
>WENV181790429
OGRP01000332
280428
Bacillota
GAA
Phe
>WENV181790507
OGRP01000497
280428
Bacillota
GAA
Phe
>WENV181790820
OGRP01002249
280428
Bacillota
GAA
Phe
>WENV181790470
OGRP01000410
229015
Bacillota
GTG
His
>WENV181790517
OGRP01000516
179917
Bacillota
CAT
Met
>WENV181790505
OGRP01000497
280466
Bacillota
TAC
Val
>WENV181790502
OGRP01000489
280492
Bacillota
CTT
Lys
>WENV181790564
OGRP01000665
280492
Bacillota
CTT
Lys
>WENV181790603
OGRP01000831
175842
Bacillota
CAC
Val
>WENV181790591
OGRP01000800
184497
Bacillota
GGG
Pro
>WENV181791250
OGRP01033413
141334
Bacillota
TAG
Leu
>WENV181791011
OGRP01004902
215243
Bacillota
CAT
Met
>WENV181790890
OGRP01002928
190476
Bacillota
CAT
Met
>WENV181790246
OGRP01000056
82124
Bacillota
TAA
Leu
>WENV181790514
OGRP01000512
82124
Bacillota
TAA
Leu
>WENV181790415
OGRP01000303
73664
Bacillota
CAG
Leu
>WENV181790664
OGRP01001072
280447
Bacillota
GAC
Val
>WENV181791019
OGRP01005054
280447
Bacillota
GAC
Val
>WENV181791132
OGRP01009959
280447
Bacillota
GAC
Val
>WENV181790884
OGRP01002873
5692
Bacillota
GCT
Ser
>WENV181791096
OGRP01007264
175825
Bacillota
GAT
Ile
>WENV181790427
OGRP01000332
280427
Bacillota
TAC
Val
>WENV181791059
OGRP01005660
284723
Bacillota
TAC
Val
>WENV181790452
OGRP01000385
73009
Bacillota
CAG
Leu
>WENV181790456
OGRP01000392
73009
Bacillota
CAG
Leu
>WENV181790666
OGRP01001095
73009
Bacillota
CAG
Leu
>WENV181791194
OGRP01020384
481217
Bacillota
GCA
Cys
>WENV181791203
OGRP01021848
189473
Bacillota
GAT
Ile
>WENV181790824
OGRP01002254
291581
Bacillota
CGG
Pro
>WENV181790408
OGRP01000294
175859
Bacillota
TCT
Arg
>WENV181791095
OGRP01007264
280436
Bacillota
TGC
Ala
>WENV181791247
OGRP01033413
330433
Bacillota
GTG
His
>WENV181790244
OGRP01000056
175847
Bacillota
GTC
Asp
>WENV181790821
OGRP01002249
290325
Bacillota
GCC
Gly
>WENV181790400
OGRP01000283
175831
Bacillota
ACG
Arg
>WENV181790250
OGRP01000056
179810
Bacillota
TCT
Arg
>WENV181790469
OGRP01000410
179810
Bacillota
TCT
Arg
>WENV181790683
OGRP01001215
294020
Bacillota
TAC
Val
>WENV181791072
OGRP01006410
295350
Bacillota
TGC
Ala
>WENV181790823
OGRP01002254
480322
Bacillota
CTG
Gln
>WENV181790956
OGRP01004004
480322
Bacillota
CTG
Gln
>WENV181790366
OGRP01000197
187364
Bacillota
CAT
Met
>WENV181790587
OGRP01000786
175868
Bacillota
GTT
Asn
>WENV181791100
OGRP01007346
314834
Bacillota
TGC
Ala
>WENV181790652
OGRP01001042
322848
Bacillota
CTT
Lys
>WENV181790586
OGRP01000786
398854
Bacillota
CTC
Glu
>WENV181791037
OGRP01005348
291576
Bacillota
CCC
Gly
>WENV181790774
OGRP01001962
480324
Bacillota
TTG
Gln
>WENV181790566
OGRP01000678
497729
Bacillota
CCA
Trp
>WENV181790347
OGRP01000178
56079
Bacillota
AAG
Leu
>WENV181790414
OGRP01000303
56079
Bacillota
AAG
Leu
>WENV181791127
OGRP01009396
323864
Bacillota
TGC
Ala
>WENV181791098
OGRP01007293
292374
Bacillota
TGC
Ala
>WENV181790574
OGRP01000756
117745
Bacillota
GTA
Tyr
>WENV181790963
OGRP01004124
280444
Bacillota
GGT
Thr
>WENV181790565
OGRP01000668
483485
Bacillota
CCC
Gly
>WENV181791249
OGRP01033413
354380
Bacillota
TTT
Lys
>WENV181790862
OGRP01002745
179755
Bacillota
CCG
Arg
>WENV181790763
OGRP01001842
46835
Bacillota
TAA
Leu
>WENV181790944
OGRP01003801
330413
Bacillota
CTT
Lys
>WENV181790891
OGRP01002928
398832
Bacillota
TTC
Glu
>WENV181791253
OGRP01033413
203851
Bacillota
TCT
Arg
>WENV181790513
OGRP01000512
118669
Bacillota
GTA
Tyr
>WENV181790875
OGRP01002797
280476
Bacillota
TTT
Lys
>WENV181790999
OGRP01004712
280476
Bacillota
TTT
Lys
>WENV181790738
OGRP01001724
332651
Bacillota
GTT
Asn
>WENV181790511
OGRP01000510
280462
Bacillota
GAA
Phe
>WENV181790312
OGRP01000114
398852
Bacillota
CTC
Glu
>WENV181790476
OGRP01000415
398852
Bacillota
CTC
Glu
>WENV181790735
OGRP01001684
398852
Bacillota
CTC
Glu
>WENV181790785
OGRP01002032
398852
Bacillota
CTC
Glu
>WENV181791077
OGRP01006524
309916
Bacillota
TTT
Lys
>WENV181791097
OGRP01007293
201856
Bacillota
GAT
Ile
>WENV181791202
OGRP01021499
360353
Bacillota
CTT
Lys
>WENV181790251
OGRP01000056
175857
Bacillota
GTG
His
>WENV181790601
OGRP01000826
398833
Bacillota
TGT
Thr
>WENV181790506
OGRP01000497
175849
Bacillota
GTC
Asp
>WENV181790883
OGRP01002873
56074
Bacillota
TGA
Ser
>WENV181790672
OGRP01001140
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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