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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735373
PJUA01017598
159152
Bacillota
GAT
Ile
>WENV183734928
PJUA01000155
236259
Bacillota
TGT
Thr
>WENV183734955
PJUA01000222
236259
Bacillota
TGT
Thr
>WENV183735056
PJUA01000634
236259
Bacillota
TGT
Thr
>WENV183735344
PJUA01014782
236259
Bacillota
TGT
Thr
>WENV183734914
PJUA01000134
243840
Bacillota
TTT
Lys
>WENV183735075
PJUA01000755
243840
Bacillota
TTT
Lys
>WENV183735132
PJUA01001177
243840
Bacillota
TTT
Lys
>WENV183735346
PJUA01014782
243840
Bacillota
TTT
Lys
>WENV183734800
PJUA01000018
16810
Bacillota
CGA
Ser
>WENV183734872
PJUA01000072
37307
Bacillota
TGA
Ser
>WENV183734954
PJUA01000222
340851
Bacillota
TTC
Glu
>WENV183735074
PJUA01000755
340851
Bacillota
TTC
Glu
>WENV183735387
PJUA01021015
340851
Bacillota
TTC
Glu
>WENV183735397
PJUA01022958
340851
Bacillota
TTC
Glu
>WENV183735058
PJUA01000634
412198
Bacillota
CCA
Trp
>WENV183735073
PJUA01000755
17450
Bacillota
GCT
Ser
>WENV183734953
PJUA01000222
17450
Bacillota
GCT
Ser
>WENV183734887
PJUA01000082
60282
Bacillota
CAG
Leu
>WENV183734886
PJUA01000082
60282
Bacillota
CAG
Leu
>WENV183735054
PJUA01000634
152983
Bacillota
GTC
Asp
>WENV183734911
PJUA01000134
152983
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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