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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170130545
CENR01009465
448583
Bacteroidota
GGT
Thr
>WENV170130816
CENR01030187
191838
Bacteroidota
CAT
Met
>WENV170130969
CENR01073439
108626
Bacteroidota
GAG
Leu
>WENV170130832
CENR01030344
156605
Bacteroidota
GAC
Val
>WENV170130563
CENR01011314
156756
Bacteroidota
TGG
Pro
>WENV170130616
CENR01017374
303411
Bacteroidota
>WENV170130618
CENR01017409
303411
Bacteroidota
>WENV170130685
CENR01023699
281190
Bacteroidota
CAT
Met
>WENV170130535
CENR01007329
223263
Bacteroidota
GTT
Asn
>WENV170130826
CENR01030285
209351
Bacteroidota
CAT
Met
>WENV170130820
CENR01030227
282369
Bacteroidota
TTT
Lys
>WENV170130638
CENR01018456
155808
Bacteroidota
TGG
Pro
>WENV170130815
CENR01030169
291910
Bacteroidota
TTG
Gln
>WENV170130493
CENR01003162
219805
Bacteroidota
GTC
Asp
>WENV170130481
CENR01001295
177083
Bacteroidota
TGT
Thr
>WENV170130474
CENR01000683
227539
Bacteroidota
GTT
Asn
>WENV170130549
CENR01009645
338178
Bacteroidota
CAT
Met
>WENV170130756
CENR01027868
338178
Bacteroidota
CAT
Met
>WENV170130814
CENR01030135
299065
Bacteroidota
TTG
Gln
>WENV170130564
CENR01011314
231584
Bacteroidota
TCT
Arg
>WENV170130680
CENR01023360
347386
Bacteroidota
CCA
Trp
>WENV170130463
CENR01000157
231598
Bacteroidota
GGC
Ala
>WENV170130825
CENR01030279
231598
Bacteroidota
GGC
Ala
>WENV170130758
CENR01027926
365090
Bacteroidota
TTT
Lys
>WENV170130726
CENR01026000
206043
Bacteroidota
GTC
Asp
>WENV170130577
CENR01012685
399898
Bacteroidota
GGT
Thr
>WENV170130978
CENR01073767
492673
Bacteroidota
GCA
Cys
>WENV170130617
CENR01017374
74739
Bacteroidota
TAA
Leu
>WENV170130980
CENR01073790
186597
Bacteroidota
GTG
His
>WENV170130512
CENR01004975
399343
Bacteroidota
TTC
Glu
>WENV170130807
CENR01030067
399343
Bacteroidota
TTC
Glu
>WENV170130659
CENR01020953
178366
Bacteroidota
CAT
Met
>WENV170130645
CENR01019668
56162
Bacteroidota
TGA
Ser
>WENV170130759
CENR01027926
74874
Bacteroidota
GAG
Leu
>WENV170130524
CENR01005846
184112
Bacteroidota
TCT
Arg
>WENV170130817
CENR01030187
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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