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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1050779
SRR035096.19629
156411
Bacteroidota
TAC
Val
>SRA1050819
SRR035096.25993
233847
Bacteroidota
TGC
Ala
>SRA1050856
SRR035096.32716
233847
Bacteroidota
TGC
Ala
>SRA1050943
SRR035096.56795
192374
Bacteroidota
GAT
Ile
>SRA1050944
SRR035096.56795
233847
Bacteroidota
TGC
Ala
>SRA1051136
SRR035096.93000
233847
Bacteroidota
TGC
Ala
>SRA1051156
SRR035096.97185
192374
Bacteroidota
GAT
Ile
>SRA1051179
SRR035096.102046
482469
Bacteroidota
GCA
Cys
>SRA1051344
SRR035096.147525
74739
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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