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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180922518
ODTJ01005099
73563
Betaproteobacteria
CAG
Leu
>WENV180922519
ODTJ01005099
73563
Betaproteobacteria
CAG
Leu
>WENV180922686
ODTJ01008434
73563
Betaproteobacteria
CAG
Leu
>WENV180922687
ODTJ01008434
73563
Betaproteobacteria
CAG
Leu
>WENV180922935
ODTJ01020171
285019
Betaproteobacteria
CCT
Arg
>WENV180923013
ODTJ01029809
180972
Betaproteobacteria
GAC
Val
>WENV180923207
ODTJ01067614
118105
Betaproteobacteria
CAA
Leu
>WENV180922803
ODTJ01012129
345625
Betaproteobacteria
TTT
Lys
>WENV180923078
ODTJ01038812
345625
Betaproteobacteria
TTT
Lys
>WENV180922229
ODTJ01002008
178781
Betaproteobacteria
TCT
Arg
>WENV180922710
ODTJ01009049
350595
Betaproteobacteria
GCC
Gly
>WENV180922772
ODTJ01010979
350595
Betaproteobacteria
GCC
Gly
>WENV180923261
ODTJ01091884
350595
Betaproteobacteria
GCC
Gly
>WENV180923439
ODTJ01181046
350595
Betaproteobacteria
GCC
Gly
>WENV180923302
ODTJ01110760
347462
Betaproteobacteria
CGT
Thr
>WENV180922133
ODTJ01001484
187637
Betaproteobacteria
>WENV180922606
ODTJ01006740
187637
Betaproteobacteria
>WENV180921738
ODTJ01000328
400529
Betaproteobacteria
CCT
Arg
>WENV180921973
ODTJ01000902
400529
Betaproteobacteria
CCT
Arg
>WENV180922418
ODTJ01003720
400529
Betaproteobacteria
CCT
Arg
>WENV180922885
ODTJ01015959
100191
Betaproteobacteria
GAG
Leu
>WENV180921747
ODTJ01000343
183991
Betaproteobacteria
>WENV180922778
ODTJ01011214
20442
Betaproteobacteria
GGA
Ser
>WENV180922948
ODTJ01021691
20442
Betaproteobacteria
GGA
Ser
>WENV180922297
ODTJ01002427
20442
Betaproteobacteria
GGA
Ser
>WENV180921953
ODTJ01000807
280601
Betaproteobacteria
TTG
Gln
>WENV180922819
ODTJ01012562
77402
Betaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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