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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183727363
PJTO01034408
149229
Betaproteobacteria
TCT
Arg
>WENV183727195
PJTO01011732
248752
Betaproteobacteria
GCC
Gly
>WENV183726689
PJTO01000068
146768
Betaproteobacteria
CAT
Met
>WENV183726690
PJTO01000068
146768
Betaproteobacteria
CAT
Met
>WENV183726560
PJTO01000011
340345
Betaproteobacteria
CCT
Arg
>WENV183726790
PJTO01000174
147332
Betaproteobacteria
CAT
Met
>WENV183726895
PJTO01000400
145695
Betaproteobacteria
GGG
Pro
>WENV183727320
PJTO01027257
145695
Betaproteobacteria
GGG
Pro
>WENV183727328
PJTO01028630
238349
Betaproteobacteria
CTT
Lys
>WENV183727327
PJTO01028630
238349
Betaproteobacteria
CTT
Lys
>WENV183727318
PJTO01026775
415147
Betaproteobacteria
CCC
Gly
>WENV183727313
PJTO01026013
147855
Betaproteobacteria
TTG
Gln
>WENV183726736
PJTO01000110
147855
Betaproteobacteria
TTG
Gln
>WENV183726637
PJTO01000044
253278
Betaproteobacteria
TTT
Lys
>WENV183726636
PJTO01000044
253278
Betaproteobacteria
TTT
Lys
>WENV183726559
PJTO01000011
253278
Betaproteobacteria
TTT
Lys
>WENV183726656
PJTO01000051
161511
Betaproteobacteria
TCT
Arg
>WENV183726789
PJTO01000174
144934
Betaproteobacteria
TTG
Gln
>WENV183726676
PJTO01000064
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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