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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183731136
PJTS01012233
248752
Betaproteobacteria
GCC
Gly
>WENV183731193
PJTS01018479
145694
Betaproteobacteria
ACG
Arg
>WENV183731211
PJTS01019485
16378
Betaproteobacteria
GGA
Ser
>WENV183731260
PJTS01028687
61762
Betaproteobacteria
TAA
Leu
>WENV183731248
PJTS01026146
251202
Betaproteobacteria
TGT
Thr
>WENV183731213
PJTS01019937
95951
Betaproteobacteria
CAA
Leu
>WENV183731147
PJTS01013292
145695
Betaproteobacteria
GGG
Pro
>WENV183731130
PJTS01011844
339484
Betaproteobacteria
CCT
Arg
>WENV183730925
PJTS01002100
2139
Betaproteobacteria
>WENV183731321
PJTS01038181
17930
Betaproteobacteria
GGA
Ser
>WENV183731305
PJTS01035208
339485
Betaproteobacteria
CAC
Val
>WENV183731187
PJTS01017718
254339
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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