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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09001751
ACQI01004891
184446
Gammaproteobacteria
GAC
Val
>ENV09001654
ACQI01000740
178025
Gammaproteobacteria
GAC
Val
>ENV09001773
ACQI01005460
281668
Gammaproteobacteria
TTT
Lys
>ENV09001774
ACQI01005460
281668
Gammaproteobacteria
TTT
Lys
>ENV09001646
ACQI01000296
199910
Gammaproteobacteria
CAT
Met
>ENV09001716
ACQI01003520
284115
Gammaproteobacteria
TAC
Val
>ENV09001718
ACQI01003520
284115
Gammaproteobacteria
TAC
Val
>ENV09001682
ACQI01002148
176301
Gammaproteobacteria
GAT
Ile
>ENV09001726
ACQI01003706
176301
Gammaproteobacteria
GAT
Ile
>ENV09001762
ACQI01005271
176301
Gammaproteobacteria
GAT
Ile
>ENV09001764
ACQI01005272
176301
Gammaproteobacteria
GAT
Ile
>ENV09001763
ACQI01005271
291401
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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