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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170136698
CENV01062951
331330
Gammaproteobacteria
TAC
Val
>WENV170136143
CENV01005296
283283
Gammaproteobacteria
TAC
Val
>WENV170136144
CENV01005296
283283
Gammaproteobacteria
TAC
Val
>WENV170136895
CENV01088582
189904
Gammaproteobacteria
CCA
Trp
>WENV170136797
CENV01076176
73116
Gammaproteobacteria
CAA
Leu
>WENV170136847
CENV01084461
178539
Gammaproteobacteria
GAC
Val
>WENV170136848
CENV01084461
178539
Gammaproteobacteria
GAC
Val
>WENV170136361
CENV01026505
318157
Gammaproteobacteria
GTT
Asn
>WENV170136427
CENV01032590
20273
Gammaproteobacteria
TGA
Ser
>WENV170136451
CENV01035961
118218
Gammaproteobacteria
TAG
Leu
>WENV170136406
CENV01030470
180053
Gammaproteobacteria
CAT
Met
>WENV170136408
CENV01030723
180053
Gammaproteobacteria
CAT
Met
>WENV170136153
CENV01006422
176662
Gammaproteobacteria
ACG
Arg
>WENV170136802
CENV01077844
178544
Gammaproteobacteria
CAT
Met
>WENV170136520
CENV01044393
302377
Gammaproteobacteria
GTT
Asn
>WENV170136657
CENV01058373
197233
Gammaproteobacteria
CAT
Met
>WENV170136152
CENV01006422
29834
Gammaproteobacteria
GCT
Ser
>WENV170136424
CENV01032199
481036
Gammaproteobacteria
GCA
Cys
>WENV170136194
CENV01010722
290068
Gammaproteobacteria
TTT
Lys
>WENV170136265
CENV01017908
197551
Gammaproteobacteria
TCT
Arg
>WENV170136598
CENV01052387
176795
Gammaproteobacteria
CAT
Met
>WENV170136542
CENV01046805
444310
Gammaproteobacteria
TTG
Gln
>WENV170136750
CENV01070069
281438
Gammaproteobacteria
GGC
Ala
>WENV170136465
CENV01037926
451238
Gammaproteobacteria
GCC
Gly
>WENV170136805
CENV01078315
178535
Gammaproteobacteria
CCT
Arg
>WENV170136239
CENV01014832
178583
Gammaproteobacteria
ACG
Arg
>WENV170136413
CENV01031118
74339
Gammaproteobacteria
GAG
Leu
>WENV170136809
CENV01078825
74339
Gammaproteobacteria
GAG
Leu
>WENV170136803
CENV01077844
118219
Gammaproteobacteria
TAG
Leu
>WENV170136619
CENV01054300
60942
Gammaproteobacteria
GGA
Ser
>WENV170136196
CENV01010998
351236
Gammaproteobacteria
TTT
Lys
>WENV170136414
CENV01031169
178540
Gammaproteobacteria
TGG
Pro
>WENV170136699
CENV01063337
73498
Gammaproteobacteria
CAA
Leu
>WENV170136287
CENV01019709
480516
Gammaproteobacteria
GCA
Cys
>WENV170136411
CENV01030884
338424
Gammaproteobacteria
TAC
Val
>WENV170136237
CENV01014832
242732
Gammaproteobacteria
ACG
Arg
>WENV170136238
CENV01014832
242732
Gammaproteobacteria
ACG
Arg
>WENV170136829
CENV01081471
243308
Gammaproteobacteria
TGG
Pro
>WENV170136213
CENV01012447
443066
Gammaproteobacteria
GGT
Thr
>WENV170136179
CENV01009133
178473
Gammaproteobacteria
TGG
Pro
>WENV170136399
CENV01030017
286623
Gammaproteobacteria
GTT
Asn
>WENV170136668
CENV01058866
118413
Gammaproteobacteria
TAG
Leu
>WENV170136142
CENV01005296
299462
Gammaproteobacteria
TTC
Glu
>WENV170136816
CENV01079267
455280
Gammaproteobacteria
TTG
Gln
>WENV170136164
CENV01007888
181520
Gammaproteobacteria
ACG
Arg
>WENV170136129
CENV01004280
282922
Gammaproteobacteria
GAA
Phe
>WENV170136574
CENV01050430
29454
Gammaproteobacteria
GGA
Ser
>WENV170136221
CENV01013277
306288
Gammaproteobacteria
GCC
Gly
>WENV170136470
CENV01038152
306288
Gammaproteobacteria
GCC
Gly
>WENV170136234
CENV01014668
287558
Gammaproteobacteria
TTC
Glu
>WENV170136732
CENV01067097
346373
Gammaproteobacteria
GAA
Phe
>WENV170136145
CENV01005296
178549
Gammaproteobacteria
GTT
Asn
>ENV000889
AY033301
176301
Gammaproteobacteria
GAT
Ile
>ENV000954
AY235676
176301
Gammaproteobacteria
GAT
Ile
>ENV000956
AY235677
176301
Gammaproteobacteria
GAT
Ile
>ENV000958
AY235678
176301
Gammaproteobacteria
GAT
Ile
>ENV000960
AY235679
176301
Gammaproteobacteria
GAT
Ile
>ENV000962
AY235680
176301
Gammaproteobacteria
GAT
Ile
>ENV001041
AY458646
176301
Gammaproteobacteria
GAT
Ile
>ENV002494
AY934140
176301
Gammaproteobacteria
GAT
Ile
>ENV002499
AY934143
176301
Gammaproteobacteria
GAT
Ile
>ENV002503
AY934145
176301
Gammaproteobacteria
GAT
Ile
>ENV002516
AY934152
176301
Gammaproteobacteria
GAT
Ile
>ENV002523
AY934156
176301
Gammaproteobacteria
GAT
Ile
>ENV002526
AY934158
176301
Gammaproteobacteria
GAT
Ile
>ENV002528
AY934159
176301
Gammaproteobacteria
GAT
Ile
>ENV002530
AY934160
176301
Gammaproteobacteria
GAT
Ile
>ENV002532
AY934161
176301
Gammaproteobacteria
GAT
Ile
>ENV002542
AY934166
176301
Gammaproteobacteria
GAT
Ile
>ENV002544
AY934167
176301
Gammaproteobacteria
GAT
Ile
>ENV002548
AY934170
176301
Gammaproteobacteria
GAT
Ile
>ENV002552
AY934172
176301
Gammaproteobacteria
GAT
Ile
>ENV002555
AY934174
176301
Gammaproteobacteria
GAT
Ile
>ENV002561
AY934177
176301
Gammaproteobacteria
GAT
Ile
>ENV002565
AY934179
176301
Gammaproteobacteria
GAT
Ile
>ENV002567
AY934180
176301
Gammaproteobacteria
GAT
Ile
>ENV002865
AY934339
176301
Gammaproteobacteria
GAT
Ile
>ENV002879
AY934347
176301
Gammaproteobacteria
GAT
Ile
>ENV002889
AY934352
176301
Gammaproteobacteria
GAT
Ile
>ENV002911
AY934367
176301
Gammaproteobacteria
GAT
Ile
>ENV002913
AY934368
176301
Gammaproteobacteria
GAT
Ile
>ENV002929
AY934376
176301
Gammaproteobacteria
GAT
Ile
>ENV002967
AY934398
176301
Gammaproteobacteria
GAT
Ile
>ENV002980
AY934405
176301
Gammaproteobacteria
GAT
Ile
>ENV002987
AY934409
176301
Gammaproteobacteria
GAT
Ile
>ENV003003
AY934417
176301
Gammaproteobacteria
GAT
Ile
>ENV003009
AY934420
176301
Gammaproteobacteria
GAT
Ile
>ENV003014
AY934423
176301
Gammaproteobacteria
GAT
Ile
>ENV003205
DQ009126
176301
Gammaproteobacteria
GAT
Ile
>ENV003207
DQ009127
176301
Gammaproteobacteria
GAT
Ile
>ENV003209
DQ009128
176301
Gammaproteobacteria
GAT
Ile
>ENV003211
DQ009129
176301
Gammaproteobacteria
GAT
Ile
>ENV003213
DQ009130
176301
Gammaproteobacteria
GAT
Ile
>ENV003224
DQ009136
176301
Gammaproteobacteria
GAT
Ile
>ENV003230
DQ009140
176301
Gammaproteobacteria
GAT
Ile
>ENV003643
DQ009372
176301
Gammaproteobacteria
GAT
Ile
>ENV003645
DQ009373
176301
Gammaproteobacteria
GAT
Ile
>ENV003717
DQ009424
176301
Gammaproteobacteria
GAT
Ile
>ENV003791
DQ009465
176301
Gammaproteobacteria
GAT
Ile
>ENV003794
DQ009467
176301
Gammaproteobacteria
GAT
Ile
>WENV170136590
CENV01052183
176301
Gammaproteobacteria
GAT
Ile
>WENV170136272
CENV01018850
89769
Gammaproteobacteria
CAG
Leu
>WENV170136477
CENV01039316
89769
Gammaproteobacteria
CAG
Leu
>WENV170136207
CENV01011528
371341
Gammaproteobacteria
GTT
Asn
>WENV170136333
CENV01023469
371341
Gammaproteobacteria
GTT
Asn
>WENV170136360
CENV01026505
371341
Gammaproteobacteria
GTT
Asn
>WENV170136277
CENV01019246
230011
Gammaproteobacteria
ACG
Arg
>WENV170136236
CENV01014832
8609
Gammaproteobacteria
GCT
Ser
>WENV170136442
CENV01035198
481314
Gammaproteobacteria
GCA
Cys
>WENV170136169
CENV01008716
315775
Gammaproteobacteria
TGT
Thr
>WENV170136255
CENV01016741
331059
Gammaproteobacteria
>WENV170136782
CENV01074420
176478
Gammaproteobacteria
CAT
Met
>WENV170136165
CENV01007936
119044
Gammaproteobacteria
GTA
Tyr
>WENV170136937
CENV01117327
480549
Gammaproteobacteria
TCC
Gly
>WENV170136154
CENV01006436
282902
Gammaproteobacteria
TGT
Thr
>WENV170136355
CENV01025627
282902
Gammaproteobacteria
TGT
Thr
>WENV170136130
CENV01004280
400928
Gammaproteobacteria
>WENV170136302
CENV01020512
73067
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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